rewirebio.iobenchmarks
Evidence claim

tables_not_extracted: gfm2-20261011-you2026-source-supplement

Tables not extracted of You et al. 2026, Supplementary Information

Supplementary Tables 2 (non-coding RNA classification), 3 (m6A modification), 6 (translation efficiency) and the main-text figures are not extracted in this batch; only the splicing tables 4 and 5 are.

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

12 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statementOriginal source and locationReview and provenance
Claimed field
tables_not_extracted
Context-only references
Benchmarking pre-trained genomic language models for RNA sequence-related predictive applications

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nat Commun 17:223, published online 2025-12-07; PMC12780105 full-text XML
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 2c6b2816846a21296c56b4dd58f3d1e8810e9d96e224d3ab21b5eb8faa9928e4

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed field
tables_not_extracted
Context-only references
You et al. 2026, Supplementary Information

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41467_2025_66899_MOESM1_ESM.pdf inside the Europe PMC supplementaryFiles zip (outer zip 9a0d0a8d8643872ab265e3e6ed7eea944563da4861bf764f97c68fc6aa502525, assembled per request; the member hash is the bound artifact)
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Supplementary Tables 2, 3 and 6
Context-only references
Benchmarking pre-trained genomic language models for RNA sequence-related predictive applications

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nat Commun 17:223, published online 2025-12-07; PMC12780105 full-text XML
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 2c6b2816846a21296c56b4dd58f3d1e8810e9d96e224d3ab21b5eb8faa9928e4

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Supplementary Tables 2, 3 and 6
Context-only references
You et al. 2026, Supplementary Information

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41467_2025_66899_MOESM1_ESM.pdf inside the Europe PMC supplementaryFiles zip (outer zip 9a0d0a8d8643872ab265e3e6ed7eea944563da4861bf764f97c68fc6aa502525, assembled per request; the member hash is the bound artifact)
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
Supplementary Tables 2 (non-coding RNA classification), 3 (m6A modification), 6 (translation efficiency) and the main-text figures are not extracted in this batch; only the splicing tables 4 and 5 are.
Context-only references
Benchmarking pre-trained genomic language models for RNA sequence-related predictive applications

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nat Commun 17:223, published online 2025-12-07; PMC12780105 full-text XML
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 2c6b2816846a21296c56b4dd58f3d1e8810e9d96e224d3ab21b5eb8faa9928e4

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
Supplementary Tables 2 (non-coding RNA classification), 3 (m6A modification), 6 (translation efficiency) and the main-text figures are not extracted in this batch; only the splicing tables 4 and 5 are.
Context-only references
You et al. 2026, Supplementary Information

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41467_2025_66899_MOESM1_ESM.pdf inside the Europe PMC supplementaryFiles zip (outer zip 9a0d0a8d8643872ab265e3e6ed7eea944563da4861bf764f97c68fc6aa502525, assembled per request; the member hash is the bound artifact)
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
Descriptive fact transcribed from the pinned source.
Context-only references
Benchmarking pre-trained genomic language models for RNA sequence-related predictive applications

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nat Commun 17:223, published online 2025-12-07; PMC12780105 full-text XML
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 2c6b2816846a21296c56b4dd58f3d1e8810e9d96e224d3ab21b5eb8faa9928e4

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
Descriptive fact transcribed from the pinned source.
Context-only references
You et al. 2026, Supplementary Information

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41467_2025_66899_MOESM1_ESM.pdf inside the Europe PMC supplementaryFiles zip (outer zip 9a0d0a8d8643872ab265e3e6ed7eea944563da4861bf764f97c68fc6aa502525, assembled per request; the member hash is the bound artifact)
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
gfm2-20261011-you2026-source-supplement
Context-only references
Benchmarking pre-trained genomic language models for RNA sequence-related predictive applications

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nat Commun 17:223, published online 2025-12-07; PMC12780105 full-text XML
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:gfm2-20261011-you2026-source-supplement

Source artifact SHA-256: 2c6b2816846a21296c56b4dd58f3d1e8810e9d96e224d3ab21b5eb8faa9928e4

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
gfm2-20261011-you2026-source-supplement
Context-only references
You et al. 2026, Supplementary Information

Original source ↗

Supplementary Tables 2, 3 and 6

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41467_2025_66899_MOESM1_ESM.pdf inside the Europe PMC supplementaryFiles zip (outer zip 9a0d0a8d8643872ab265e3e6ed7eea944563da4861bf764f97c68fc6aa502525, assembled per request; the member hash is the bound artifact)
Retrieved: 2026-10-11T00:55:34Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:gfm2-20261011-you2026-source-supplement

Source artifact SHA-256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

2 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: gfm2-20261011-you2026-claim-not-extracted

field
tables_not_extracted
value
Supplementary Tables 2 (non-coding RNA classification), 3 (m6A modification), 6 (translation efficiency) and the main-text figures are not extracted in this batch; only the splicing tables 4 and 5 are.
source locator
Supplementary Tables 2, 3 and 6
review
method: source-hash-verification; pdf-text-parse; independent-cell-check; method note: Re-downloaded the article XML (SHA-256 matches) and the supplementaryFiles zip, whose MOESM1_ESM.pdf member matches the pinned SHA-256. Parsed Supplementary Tables 4 and 5 from the `pdftotext -layout` (poppler 26.08.0) text with a separate parser (review/review.py) and checked printed value, numeric value, spread, metric, qualifier, unit, direction, locator and the linked configuration, protocol and dataset against the block, row and column labels and the article's Methods and Table 1.; reviewer: claude; reviewer note: Claude (Opus 5.5) review agent reviewer-gfm-a, independent of the extractor lit-gfm-2; no human review claimed; date: 2026-10-11; artifact sha256: cbb69e05045a4526e35479d2c1361ebb9cfadfd968e00675390dad597035d882; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12780105/supplementaryFiles; note: Independent review 2026-10-11: Supplementary Tables 2, 3 and 6 are present and unextracted, as stated.
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