Baseline

DeepSets comparator role

Source-supported comparator role; measured values belong to linked evaluations.

Evaluation results

0 evaluations · 0 results. Different protocols are not a single leaderboard.

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Source checking is not independent reproduction. Release 2026-09-30-e37e3ab1284d.

Applicable tests and references

Applicability is distinct from a completed evaluation.

MSAlign molecular retrieval MassSpecGym formula split: no formula, R@1: MassSpecGym formula split retrieval with no formula · Proposed association
MSAlign molecular retrieval MassSpecGym formula split: no formula, R@20: MassSpecGym formula split retrieval with no formula · Proposed association
MSAlign molecular retrieval MassSpecGym MCES split: no formula, R@1: MassSpecGym MCES split retrieval with no formula · Proposed association
MSAlign molecular retrieval MassSpecGym MCES split: no formula, R@20: MassSpecGym MCES split retrieval with no formula · Proposed association

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-30-e37e3ab1284d
Property and statement	Original source and location	Review and provenance
attributes.applicability source_supported Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.applicability` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
attributes.baseline_type established_method Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.baseline_type` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
attributes.source_locator Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
description Source-supported comparator role; measured values belong to linked evaluations. Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `description` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: applicable to msalign-2026-table3-task-massspecgym-formula-split-no-formula-r-1 Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:applicable_to:msalign-2026-table3-task-massspecgym-formula-split-no-formula-r-1` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: applicable to msalign-2026-table3-task-massspecgym-formula-split-no-formula-r-20 Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:applicable_to:msalign-2026-table3-task-massspecgym-formula-split-no-formula-r-20` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: applicable to msalign-2026-table3-task-massspecgym-mces-split-no-formula-r-1 Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:applicable_to:msalign-2026-table3-task-massspecgym-mces-split-no-formula-r-1` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: applicable to msalign-2026-table3-task-massspecgym-mces-split-no-formula-r-20 Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:applicable_to:msalign-2026-table3-task-massspecgym-mces-split-no-formula-r-20` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: configuration msalign-2026-table3-method-deepsets Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:configuration:msalign-2026-table3-method-deepsets` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Relationship: evaluation msalign-2026-table3-evaluation-deepsets-massspecgym-formula-split-no-formula-r-1 Context-only references	msalign: Primary paper PDF Original source ↗ Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets) Version: 2605.19752v1 Retrieved: 2026-09-16T20:04:04.777728+00:00	not individually reviewed No individual claim review recorded Audit details Field: `links:evaluation:msalign-2026-table3-evaluation-deepsets-massspecgym-formula-split-no-formula-r-1` Source artifact SHA-256: `7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact

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Sources and history

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Release 2026-09-30-e37e3ab1284d · Record review: source checked

1 source records and release history

msalign: Primary paper PDF · Original source · 2605.19752v1

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Technical metadata and extraction receipts

Stable ID: uc20260930-baseline-msalign-2026-table3-method-deepsets

areas: metabolomics
baseline type: established_method
applicability: source_supported
source locator: Table 3, MassSpecGym MCES split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym MCES split, row R@20, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@1, column 4 (DeepSets); Table 3, MassSpecGym formula split, row R@20, column 4 (DeepSets)
review: method: automated_source_review; reviewer: Codex experimental-use-case curation; date: 2026-09-30; reviewed at: 2026-09-30T21:40:59.576893+00:00; scope: Primary-source transcription and catalogue applicability audit; not human scientific review or independent experimental reproduction.

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