0.692(0.006) AUPRC
CompGCN: AUPRC on SugarBase immunogenicity · Immuno
- Tested configuration
- CompGCN
- Protocol
- SugarBase immunogenicity · Immuno (GlycanML immunogenicity prediction)
- Dataset
- SugarBase immunogenicity · Immuno
- Procedure
- Author-reported single-task models on the same held-out task; not a cross-paper ranking. Taxonomy, immunogenicity and glycosylation: motif-frequency K-means cluster allocation 8:1:1. Interaction: MMseqs2 protein clusters at minimum identity 0.5 allocated 8:1:1. Exact counts are attached to each column.
- Evaluation
- CompGCN: SugarBase immunogenicity · Immuno
- Coverage
- scored: unreported; eligible: unreported
- Uncertainty
- type: standard_deviation; value: 0.006; n: 3; unit: same_as_metric
- Evidence
- Author-reported evaluation · source checkedGlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 3, row CompGCN, column Immuno
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Reproduction
- Split
- Taxonomy, immunogenicity and glycosylation: motif-frequency K-means cluster allocation 8:1:1. Interaction: MMseqs2 protein clusters at minimum identity 0.5 allocated 8:1:1. Exact counts are attached to each column.
- Adaptation
- CompGCN architecture in Table 2; single-task supervised encoder plus MLP; interaction additionally uses ESM-1b protein embeddings
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.692(0.006) Individual claims | GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning Table 3, row CompGCN, column Immuno Version: arXiv:2405.16206v1, 2024-05-25 | source checked Primary-table transcription and separate automated source review · 2026-09-17 author reported Audit detailsSource checked does not mean experimentally reproduced. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
1 source records and release history
- GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Original source · arXiv:2405.16206v1, 2024-05-25
Technical metadata and extraction receipts
Stable ID: paper-result-8afa28bb629f98ba97
- areas
- glycomics
- printed value
- 0.692(0.006)
- numeric value
- 0.692
- metric
- AUPRC
- metric direction
- higher
- unit
- dimensionless
- uncertainty
- type: standard_deviation; value: 0.006; n: 3; unit: same_as_metric
- eligible count
- Not reported
- scored count
- Not reported
- reported population
- train validation test: 1026; 149; 145; note: Dataset split sizes, not per-model scored counts.
- source locator
- Table 3, row CompGCN, column Immuno
- source occurrences
- source id: expansion-p3-glycanml-2405-16206v1; locator: Table 3, row CompGCN, column Immuno
- review
- method: Primary-table transcription and separate automated source review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.
- missing metadata
- scored count: unreported; eligible count: unextracted; checkpoint revision: unextracted; uncertainty: inapplicable
Related records
- evaluation: CompGCN: SugarBase immunogenicity · Immuno