Accuracy of GIN on GlyConnect glycosylation · Glycos
97.16(0.19)% Accuracy
Methods
- Tested configuration
- GIN
- Protocol
- GlyConnect glycosylation · Glycos (GlycanML glycosylation type prediction)
- Dataset
- GlyConnect glycosylation · Glycos
- Procedure
- Author-reported single-task models on the same held-out task; not a cross-paper ranking. Taxonomy, immunogenicity and glycosylation: motif-frequency K-means cluster allocation 8:1:1. Interaction: MMseqs2 protein clusters at minimum identity 0.5 allocated 8:1:1. Exact counts are attached to each column.
- Evaluation
- GIN: GlyConnect glycosylation · Glycos
- Coverage
- Not reported scored / Not reported eligible
- Uncertainty
- SD 0.19
- Evidence
- Author-reported evaluation · source checkedGlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Table 3, row GIN, column Glycos
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Reproduction
- Split
- Taxonomy, immunogenicity and glycosylation: motif-frequency K-means cluster allocation 8:1:1. Interaction: MMseqs2 protein clusters at minimum identity 0.5 allocated 8:1:1. Exact counts are attached to each column.
- Adaptation
- GIN architecture in Table 2; single-task supervised encoder plus MLP; interaction additionally uses ESM-1b protein embeddings
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 97.16(0.19) Individual claims | GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning Table 3, row GIN, column Glycos Version: arXiv:2405.16206v1, 2024-05-25 | source checked ["transcription","automated-source-review"] · 2026-09-17 author reported Audit detailsSource checked does not mean experimentally reproduced. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- GlycanML: A Multi-Task and Multi-Structure Benchmark for Glycan Machine Learning · Original source · arXiv:2405.16206v1, 2024-05-25
Technical metadata and extraction receipts
Stable ID: paper-result-04b741864eefb0125e
- areas
- glycans
- printed value
- 97.16(0.19)
- numeric value
- 97.16
- metric
- accuracy
- metric direction
- higher
- unit
- percent
- uncertainty
- type: standard_deviation; value: 0.19; n: 3
- reported population
- train validation test: 1356; 163; 164; note: Dataset split sizes, not per-model scored counts.
- source locator
- Table 3, row GIN, column Glycos
- source occurrences
- source id: expansion-p3-glycanml-2405-16206v1; locator: Table 3, row GIN, column Glycos
- review
- method: transcription; automated-source-review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.; method note: primary table; source review separate from transcription
- missing metadata
- checkpoint revision: reason: unextracted; eligible count: reason: unextracted; scored count: reason: unreported
Related records
- evaluation: GIN: GlyConnect glycosylation · Glycos