Result

AUPRC of rnamsm on mRNABench eCLIP (mRNABench split)

0.281 ± 0.002 AUPRC

Methods

Tested pipeline: rnamsm
Protocol: mRNABench variant probes eCLIP: eCLIP binding site prediction
Dataset subset: mRNABench eCLIP (mRNABench split)
Procedure: Frozen transcript representations with task-specific linear probes, or named supervised/naive controls. Homology splits where possible; random splits for MRL-MPRA, MRL-HL-Pair and VEP. Reported mean over ten splits; Appendix C enumerates nine seeds. Table captions say ten random splits, while Methods specify homology splits where possible. This source ambiguity and the nine explicitly listed seeds are retained; exact split manifests remain unextracted. Appendix C uses micro-averaged multilabel metrics.
Evaluation: rnamsm on mRNABench variant probes eCLIP: eCLIP binding site prediction
Coverage: Not reported scored / Not reported eligible
Uncertainty: 95% CI ± 0.002
Evidence: Author-reported evaluation · source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 5 (XML T2), data row 40, XML tr 42, column 4 (eCLIP | AUPRC), model rnamsm

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.

Reproduction

Split: Not reported
Adaptation: Not reported
Scoring implementation: AUPRC

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Reported result 0.281 ± 0.002 Individual claims	mRNABench: A curated benchmark for mature mRNA property and function prediction Original source ↗ Table 5 (XML T2), data row 40, XML tr 42, column 4 (eCLIP \| AUPRC), model rnamsm Version: preprint archived 2025-07-08 Retrieved: 2026-09-16T10:41:16.497221+00:00	source checked ["transcription","independent-cell-check"] · 2026-09-23 author reported Audit details Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied. Field: `attributes.printed_value` Source artifact SHA-256: `79f6264ee883535203c63a313547e7c57baa85585f76b42f8d899eb17fb7e600` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact Extraction artifact SHA-256: `79f6264ee883535203c63a313547e7c57baa85585f76b42f8d899eb17fb7e600` Extraction artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

1 source record and release history

mRNABench: A curated benchmark for mature mRNA property and function prediction · Original source · preprint archived 2025-07-08

Download this release (gzip)

Technical metadata and extraction receipts

Stable ID: mrnabench-variants-2025-result-rnamsm-eclip-auprc

areas: rna-transcriptomes
tasks: eCLIP binding site prediction
metric: auprc
metric direction: higher
unit: fraction
printed value: 0.281 ± 0.002
numeric value: 0.281
uncertainty: type: confidence_interval; level: 0.95; half width: 0.002; scope: mean over ten random splits (table caption wording)
source locator: Table 5 (XML T2), data row 40, XML tr 42, column 4 (eCLIP | AUPRC), model rnamsm
missing metadata: denominator: reason: unextracted; seeds: reason: unreported
review: method: transcription; independent-cell-check; reviewer: codex; date: 2026-09-23; artifact sha256: 79f6264ee883535203c63a313547e7c57baa85585f76b42f8d899eb17fb7e600; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12265608/fullTextXML; method note: complete XML table; exact cell strings independently checked; localization columns quarantined for conflicting metric labels; reviewer note: role: automated source review; note: Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied.
evidence experiment set id: mrnabench-2025-linear-probing-default-splits

Related records

evaluation: rnamsm on mRNABench variant probes eCLIP: eCLIP binding site prediction

Suggest a correction