Result

MCC (1-shot; category 'Histone Mod.') of NT-v2-50m-3mer-MS (GENEB leaderboard) on GENEB 100 tasks

0.115 MCC (1-shot; category 'Histone Mod.')

Methods

Tested configuration: NT-v2-50m-3mer-MS (GENEB leaderboard)
Protocol: GENEB leaderboard, 1-shot, MCC aggregates
Dataset: GENEB 100 tasks
Procedure: GENEB leaderboard, 1-shot, MCC aggregates
Evaluation: NT-v2-50m-3mer-MS on GENEB (1-shot)
Coverage: Not reported scored / Not reported eligible
Uncertainty: Not reported by the source
Evidence: Independent external evaluation · source checkedGENEB leaderboard (leaderboard.json, 13 task-type aggregates) · leaderboard.json data.1shot, model 'nucleotide-transformer-v2-50m-3mer-multi-species', key 'cat_MCC.Histone Mod.'

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.

Reproduction

Split: 1-shot
Adaptation: Logistic-regression probe on frozen embeddings
Scoring implementation: MCC

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statement	Original source and location	Review and provenance
Reported result 0.1152576618582475 Individual claims	GENEB leaderboard (leaderboard.json, 13 task-type aggregates) Original source ↗ leaderboard.json data.1shot, model 'nucleotide-transformer-v2-50m-3mer-multi-species', key 'cat_MCC.Histone Mod.' Version: Git commit 9642d481e40c0af23995dcd162b779613f789f97 (repository pushed 2026-08-22) Retrieved: 2026-10-11T01:42:40Z	source checked ["source-hash-verification","deterministic-table-parse","independent-cell-check"] · 2026-10-11 independent paper Audit details Extraction: Read the pinned leaderboard.json with tools/extract_geneb.py; keys data.<regime>[i].micro_MCC, macro_MCC and cat_MCC.<category>; model id from the 'model' key. leaderboard.json data.1shot, model 'nucleotide-transformer-v2-50m-3mer-multi-species', key 'cat_MCC.Histone Mod.' Independent review 2026-10-11: value, locator, metric, unit, direction and linked configuration and protocol checked; corrections from the review applied by the extractor as listed in review.md. Field: `attributes.printed_value` Source artifact SHA-256: `7c8a9d985e7c2df24514f309bf6102e4f81d9da1b9afbb74856d87e78e01f738` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `7c8a9d985e7c2df24514f309bf6102e4f81d9da1b9afbb74856d87e78e01f738` Extraction artifact

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release history

GENEB leaderboard (leaderboard.json, 13 task-type aggregates) · Original source · Git commit 9642d481e40c0af23995dcd162b779613f789f97 (repository pushed 2026-08-22)

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Technical metadata and extraction receipts

Stable ID: lit-genomics-20261011-geneb-result-nucleotide-transformer-v2-50m-3mer-multi-species-1shot-histone-mod

metric: matthews-correlation-coefficient
metric direction: higher
unit: unitless
printed value: 0.1152576618582475
source locator: leaderboard.json data.1shot, model 'nucleotide-transformer-v2-50m-3mer-multi-species', key 'cat_MCC.Histone Mod.'
review: method: source-hash-verification; deterministic-table-parse; independent-cell-check; method note: Re-fetched leaderboard.json at commit 9642d481 and matched its SHA-256; an automated comparison of all 1,845 results against the JSON keys found 0 mismatches; a separate jq check of a stratified sample of 66 values also matched.; reviewer: claude; reviewer note: Claude review agent reviewer-gen-1, independent of the extractor lit-genomics; no human review claimed; date: 2026-10-11; artifact sha256: 7c8a9d985e7c2df24514f309bf6102e4f81d9da1b9afbb74856d87e78e01f738; retrieval url: https://raw.githubusercontent.com/darlednik/GENEB/9642d481e40c0af23995dcd162b779613f789f97/leaderboard/leaderboard.json; note: Extraction: Read the pinned leaderboard.json with tools/extract_geneb.py; keys data.<regime>[i].micro_MCC, macro_MCC and cat_MCC.<category>; model id from the 'model' key. leaderboard.json data.1shot, model 'nucleotide-transformer-v2-50m-3mer-multi-species', key 'cat_MCC.Histone Mod.' Independent review 2026-10-11: value, locator, metric, unit, direction and linked configuration and protocol checked; corrections from the review applied by the extractor as listed in review.md.
numeric value: 0.1152576618582475
metric qualifier: 1-shot; category 'Histone Mod.'
missing metadata: uncertainty: reason: unreported
printed value basis: Full-precision JSON number as stored

Related records

evaluation: NT-v2-50m-3mer-MS on GENEB (1-shot)

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