Result

Pearson of GENA-LM (GenBench) on GenBench Drosophila enhancer activity (hk)

0.74 Pearson

Methods

Tested configuration: GENA-LM (GenBench)
Protocol: GenBench Drosophila enhancer activity (hk)
Dataset: GenBench Drosophila enhancer activity (hk)
Procedure: GenBench Drosophila enhancer activity (hk)
Evaluation: GENA-LM on GenBench Drosophila enhancer activity (hk)
Coverage: Not reported scored / Not reported eligible
Uncertainty: Not reported by the source
Evidence: Independent external evaluation · source checkedGenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Table 3, row 'Drosophila enhancer activity (hk)', column 'GENA-LM'

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.

Reproduction

Split: GenBench split
Adaptation: Fine-tuned
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statement	Original source and location	Review and provenance
Reported result 0.740 Individual claims	GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models Original source ↗ Table 3, row 'Drosophila enhancer activity (hk)', column 'GENA-LM' Version: arXiv 2406.01627 version 2 Retrieved: 2026-10-11T01:42:08Z	source checked ["source-hash-verification","pdf-text-parse","independent-cell-check","rendered-source-visual-check"] · 2026-10-11 independent paper Audit details Extraction: Parsed the pdftotext -layout text of the pinned arXiv PDF with tools/extract_genbench.py; header model names and row labels asserted per table. Table 3, row 'Drosophila enhancer activity (hk)', column 'GENA-LM' Independent review 2026-10-11: value, locator, metric, unit, direction and linked configuration and protocol checked; corrections from the review applied by the extractor as listed in review.md. Field: `attributes.printed_value` Source artifact SHA-256: `24105d26b25a6adf7509334b041d44e145d5006dfedf87e812e12138fa154f12` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `24105d26b25a6adf7509334b041d44e145d5006dfedf87e812e12138fa154f12` Extraction artifact

How to read the evidence

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release history

GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models · Original source · arXiv 2406.01627 version 2

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Technical metadata and extraction receipts

Stable ID: lit-genomics-20261011-genbench-result-gena-lm-drosophila-enhancer-activity-hk

metric: pearson-correlation
metric direction: higher
unit: unitless
printed value: 0.740
source locator: Table 3, row 'Drosophila enhancer activity (hk)', column 'GENA-LM'
review: method: source-hash-verification; pdf-text-parse; independent-cell-check; rendered-source-visual-check; method note: Matched the re-downloaded arXiv v2 PDF's SHA-256; an independent parser compared all results across Tables 3-8 and 10 with 0 mismatches; a seeded stratified sample of 61 cells was checked against rendered pages 6, 7 and 15.; reviewer: claude; reviewer note: Claude review agent reviewer-gen-2, independent of the extractor lit-genomics; no human review claimed; date: 2026-10-11; artifact sha256: 24105d26b25a6adf7509334b041d44e145d5006dfedf87e812e12138fa154f12; retrieval url: https://arxiv.org/pdf/2406.01627v2; note: Extraction: Parsed the pdftotext -layout text of the pinned arXiv PDF with tools/extract_genbench.py; header model names and row labels asserted per table. Table 3, row 'Drosophila enhancer activity (hk)', column 'GENA-LM' Independent review 2026-10-11: value, locator, metric, unit, direction and linked configuration and protocol checked; corrections from the review applied by the extractor as listed in review.md.
numeric value: 0.740
missing metadata: uncertainty: reason: unreported

Related records

evaluation: GENA-LM on GenBench Drosophila enhancer activity (hk)

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