Result

0.725 AUROC

PlantCAD2 · AUROC · Andropogoneae genome-wide conservation

Tested configuration: PlantCAD2
Task: cross-species conservation prediction
Dataset: Andropogoneae genome-wide conservation
Procedure: Zero-shot score for conserved versus non-conserved sites from alignments of 35 Andropogoneae genomes
Evaluation: PlantCAD2: cross-species conservation prediction
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedPlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: Not reported
Adaptation: Not reported
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: cross-species conservation prediction

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 0.725 Individual claims	PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms Original source ↗ Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry Version: preprint version in PMC Retrieved: 2026-09-16T10:41:06Z	source checked independent ai table review · 2026-09-16T10:41:06Z author reported Audit details First comparison entry is PlantCAD2; AUROC is 0.725 versus comparator 0.691. Transcription verified; experimental claims not independently reproduced. Field: `attributes.printed_value` Claim: claim-lit-b4-002 Source artifact SHA-256: `4891955edb33af61e36dad51110574aa242e77c2df36429f100ff5a54bd8bd4b` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `4891955edb33af61e36dad51110574aa242e77c2df36429f100ff5a54bd8bd4b` Extraction artifact

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Sources and history

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms · Original source · preprint version in PMC

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Technical metadata and extraction receipts

Stable ID: lit-b4-002

areas: dna-genomes
tasks: cross-species conservation prediction
printed value: 0.725
numeric value: 0.725
metric: AUROC
metric direction: unknown
unit: fraction
uncertainty: Not reported
source locator: Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry
review: method: independent_ai_table_review; reviewer: Codex primary curator table review; reviewed at: 2026-09-16T10:41:06Z; notes: First comparison entry is PlantCAD2; AUROC is 0.725 versus comparator 0.691. Transcription verified; experimental claims not independently reproduced.; evidence: 0.725 vs 0.691; artifact sha256: 4891955edb33af61e36dad51110574aa242e77c2df36429f100ff5a54bd8bd4b; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12425018/fullTextXML
legacy id: lit-b4-002
legacy row: id: lit-b4-002; paper id: plantcad2-2025; domain id: dna-genomes; task: cross-species conservation prediction; model: PlantCAD2; model version: Not reported; dataset: Andropogoneae genome-wide conservation; dataset version: Not reported; split: Not reported; metric: AUROC; value: 0.725; unit: fraction; uncertainty: Not reported; protocol: Zero-shot score for conserved versus non-conserved sites from alignments of 35 Andropogoneae genomes; source locator: Table 1, Cross-species evolutionary conservation > Conservation within Andropogoneae (Genome-wide) row, PlantCAD2 AUROC entry; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12425018/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:37:05Z
missing metadata: model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: PlantCAD2: cross-species conservation prediction
subject: Reported AUROC for PlantCAD2

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