Result

0.169 Average prophage F1

VIBRANT · Average prophage F1 · 20 medium/high-complexity viral simulations

Tested configuration: VIBRANT
Task: Simulated prophage-contig detection
Dataset: 20 medium/high-complexity viral simulations
Procedure: Average across twenty medium- and high-complexity simulated communities.
Evaluation: VIBRANT: Simulated prophage-contig detection
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Independent external evaluation · source checkedSimulation study and comparative evaluation of viral contiguous sequence identification tools · Table 3, Vibrant row, Prophage F1 column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: Not reported
Adaptation: Not reported
Scoring implementation: Not reported

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Access requirements and official instructions: Simulated prophage-contig detection

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 0.169 Individual claims	Simulation study and comparative evaluation of viral contiguous sequence identification tools Original source ↗ Table 3, Vibrant row, Prophage F1 column Version: version of record Retrieved: 2026-09-16T10:33:50.134Z	source checked primary xml exact label cell check · 2026-09-16T10:33:50.134Z independent paper Audit details Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness. Field: `attributes.printed_value` Claim: claim-lit-b3-025 Source artifact SHA-256: `93a24652edfa6d9f686862479df3addf50a2d5d432d2d5a31882075fa59dfdfd` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `93a24652edfa6d9f686862479df3addf50a2d5d432d2d5a31882075fa59dfdfd` Extraction artifact

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

Simulation study and comparative evaluation of viral contiguous sequence identification tools · Original source · version of record

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Technical metadata and extraction receipts

Stable ID: lit-b3-025

areas: microbes-communities
tasks: Simulated prophage-contig detection
printed value: 0.169
numeric value: 0.169
metric: Average prophage F1
metric direction: unknown
unit: unitless
uncertainty: Not reported
source locator: Table 3, Vibrant row, Prophage F1 column
review: method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:50.134Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 3, Vibrant row, Prophage F1 column; cell: 0.169; artifact sha256: 93a24652edfa6d9f686862479df3addf50a2d5d432d2d5a31882075fa59dfdfd; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC8207588/fullTextXML
legacy id: lit-b3-025
legacy row: id: lit-b3-025; paper id: viral-contig-simulation-2021; domain id: microbes-communities; task: Simulated prophage-contig detection; model: VIBRANT; model version: Not reported; dataset: 20 medium/high-complexity viral simulations; dataset version: Not reported; split: Not reported; metric: Average prophage F1; value: 0.169; unit: unitless; uncertainty: Not reported; protocol: Average across twenty medium- and high-complexity simulated communities.; source locator: Table 3, Vibrant row, Prophage F1 column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC8207588/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:29:32Z
missing metadata: model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: VIBRANT: Simulated prophage-contig detection
subject: Reported Average prophage F1 for VIBRANT

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