Result

0.626 F1

MINGLE · F1 · MosA1 reference → WholeBrainA query

Tested configuration: MINGLE
Task: Cross-platform scATAC cell-type annotation
Dataset: MosA1 reference → WholeBrainA query
Procedure: Cross-platform reference-query comparator.
Evaluation: MINGLE: Cross-platform scATAC cell-type annotation
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Independent external evaluation · source checkedCell type annotation for scATAC-seq via DNA large language model and graph domain adaptation · Table 2, MINGLE row, Ref: MosA1 / Q: WholeBrainA F1 column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: Not reported
Adaptation: Not reported
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: Cross-platform scATAC cell-type annotation

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 0.6256 Individual claims	Cell type annotation for scATAC-seq via DNA large language model and graph domain adaptation Original source ↗ Table 2, MINGLE row, Ref: MosA1 / Q: WholeBrainA F1 column Version: version of record Retrieved: 2026-09-16T10:44:03.395850+00:00	source checked independent ai table review · 2026-09-16T10:44:03.397272+00:00 independent paper Audit details First reference/query block MosA1 to WholeBrainA, F1 second column in block; direction of transfer is part of protocol. Source check verifies central value and table context, not experiment reproduction or all metadata. Field: `attributes.printed_value` Claim: claim-lit-b3-006 Source artifact SHA-256: `f1cdc7d54c6b2d491e4a74a44a1188a3679c555262c988e95a1c0de4614fe3cb` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `f1cdc7d54c6b2d491e4a74a44a1188a3679c555262c988e95a1c0de4614fe3cb` Extraction artifact

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Sources and history

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

Cell type annotation for scATAC-seq via DNA large language model and graph domain adaptation · Original source · version of record

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Technical metadata and extraction receipts

Stable ID: lit-b3-006

areas: cells-tissues
tasks: Cross-platform scATAC cell-type annotation
printed value: 0.6256
numeric value: 0.6256
metric: F1
metric direction: unknown
unit: unitless
uncertainty: Not reported
source locator: Table 2, MINGLE row, Ref: MosA1 / Q: WholeBrainA F1 column
review: method: independent_ai_table_review; reviewer: Codex omics research agent; independent source-table review, not human review; reviewed at: 2026-09-16T10:44:03.397272+00:00; notes: First reference/query block MosA1 to WholeBrainA, F1 second column in block; direction of transfer is part of protocol. Source check verifies central value and table context, not experiment reproduction or all metadata.; evidence: {"table_xml_id": "pcbi.1014226.t002", "row_cells": ["MINGLE", "0.7143", "0.6256", "0.7095", "0.32", "0.7097", "0.6243", "0.6459", "0.2973", "0.6665", "0.6022", "0.7033", "0.3756"], "selected_cell_zero_based": 2, "selected_cell_xml": "<td align=\"left\" rowspan=\"1\" colspan=\"1\">0.6256</td>", "caption": "Cell type annotation between snATAC-seq and sciATAC-seq platforms."}; artifact sha256: f1cdc7d54c6b2d491e4a74a44a1188a3679c555262c988e95a1c0de4614fe3cb; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13132462/fullTextXML
legacy id: lit-b3-006
legacy row: id: lit-b3-006; paper id: scatac-llmda-2026; domain id: cells-tissues; task: Cross-platform scATAC cell-type annotation; model: MINGLE; model version: Not reported; dataset: MosA1 reference → WholeBrainA query; dataset version: Not reported; split: Not reported; metric: F1; value: 0.6256; unit: unitless; uncertainty: Not reported; protocol: Cross-platform reference-query comparator.; source locator: Table 2, MINGLE row, Ref: MosA1 / Q: WholeBrainA F1 column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC13132462/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:29:32Z
missing metadata: model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: MINGLE: Cross-platform scATAC cell-type annotation
subject: Reported F1 for MINGLE

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