Result

55.7 Median F1

DEBFold · Median F1 · DEBFold TestSetβ

Tested pipeline: DEBFold
Task: RNA secondary structure
Dataset: DEBFold TestSetβ
Procedure: Median F1 on the prepared TestSetβ.
Evaluation: DEBFold: RNA secondary structure
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedDEBFold: Computational Identification of RNA Secondary Structures for Sequences across Structural Families Using Deep Learning · Table 1, DEBFold row, TestSetβ F1 (%) column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: Not reported
Adaptation: Not reported
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: RNA secondary structure

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 55.7 Individual claims	DEBFold: Computational Identification of RNA Secondary Structures for Sequences across Structural Families Using Deep Learning Original source ↗ Table 1, DEBFold row, TestSetβ F1 (%) column Version: PMC11094721.1 Retrieved: 2026-09-16T10:41:16.509290+00:00	source checked independent ai table review · 2026-09-16T10:41:16.509290+00:00 author reported Audit details TestSet beta is the second four-column block. F1 (%) is its first column; caption reports test-set median F1. This verifies the central score at its source location, not every metadata field or an experimental reproduction. Field: `attributes.printed_value` Claim: claim-lit-015 Source artifact SHA-256: `e8f960eafb7f00edfdd81d4fb75c6de838e9b872b7e18875fc7a5bff2a2f72b3` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `e8f960eafb7f00edfdd81d4fb75c6de838e9b872b7e18875fc7a5bff2a2f72b3` Extraction artifact

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Sources and history

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

DEBFold: Computational Identification of RNA Secondary Structures for Sequences across Structural Families Using Deep Learning · Original source · PMC11094721.1

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Technical metadata and extraction receipts

Stable ID: lit-015

areas: rna-transcriptomes
tasks: RNA secondary structure
printed value: 55.7
numeric value: 55.7
metric: Median F1
metric direction: unknown
unit: %
uncertainty: Not reported
source locator: Table 1, DEBFold row, TestSetβ F1 (%) column
review: method: independent_ai_table_review; reviewer: Codex omics research agent; independent source-table review, not human review; reviewed at: 2026-09-16T10:41:16.509290+00:00; notes: TestSet beta is the second four-column block. F1 (%) is its first column; caption reports test-set median F1. This verifies the central score at its source location, not every metadata field or an experimental reproduction.; evidence: {"table_xml_id": "tbl1", "row_cells": ["DEBFold", "64.9", "62.1", "67.9", "4", "55.7", "56.4", "56.8", "1", "77.9", "83.3", "73.2", "1", "64.9", "1"], "selected_cell_zero_based": 5, "selected_cell_xml": "<td style=\"border:none;\" align=\"left\" colspan=\"1\" rowspan=\"1\">55.7</td>", "caption": "Test Set Median F1 Score Performance Comparison between DEBFold and Other Available Thermodynamics-Based RNA Secondary Structure Prediction Tools on the Three Prepared Test Setsa"}; artifact sha256: e8f960eafb7f00edfdd81d4fb75c6de838e9b872b7e18875fc7a5bff2a2f72b3; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11094721/fullTextXML
legacy id: lit-015
legacy row: id: lit-015; paper id: debfold-2024; domain id: rna-transcriptomes; task: RNA secondary structure; model: DEBFold; model version: Not reported; dataset: DEBFold TestSetβ; dataset version: Not reported; split: Not reported; metric: Median F1; value: 55.7; unit: %; uncertainty: Not reported; protocol: Median F1 on the prepared TestSetβ.; source locator: Table 1, DEBFold row, TestSetβ F1 (%) column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC11094721/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:25:00Z
missing metadata: model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: DEBFold: RNA secondary structure
subject: Reported Median F1 for DEBFold

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