0.888 recall
behera2024-dragen42-cnv-sv-10-20kb recall (deletions, [10,000-20,0000) bp)
- Tested configuration
- DRAGEN 4.2 CNV+SV configuration
- Protocol
- HG002 GIAB v0.6 CNV deletion [10,000-20,0000) bp (DRAGEN Table S4)
- Dataset
- HG002 35x WGS, GIAB SV v0.6 deletions >1 kb, Table S4 length bins
- Procedure
- cnv-20261009-protocol-behera2024-hg002-cnv-del-10-20kb
- Evaluation
- DRAGEN4.2 (CNV+SV) deletion [10,000-20,0000)
- Coverage
- Not reported scored / Not reported eligible
- Uncertainty
- Not reported by the source
- Evidence
- Author-reported evaluation · source checkedComprehensive genome analysis and variant detection at scale using DRAGEN; DRAGEN supplementary tables 1–17 · Supplementary Tables XLSX sheet 'S4 CNV benchmarking', F8; row [10,000-20,0000); column DRAGEN4.2 (CNV+SV) Recall
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Reproduction
- Split
- Single HG002 benchmark sample
- Adaptation
- Not reported
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.888 Individual claims | Comprehensive genome analysis and variant detection at scale using DRAGEN Supplementary Tables XLSX sheet 'S4 CNV benchmarking', F8; row [10,000-20,0000); column DRAGEN4.2 (CNV+SV) Recall Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 2024-10-25 version of record; code-availability correction 2024-12-02; July 2025 issue | source checked ["source-hash-verification","deterministic-table-parse","independent-cell-check"] · 2026-10-09 author reported Audit detailsExtracted by deterministic parse of the pinned XLSX cell XML (scripts in the batch retrieval log), with row and column labels asserted. printed_value is the shortest round-trip decimal of the stored cell value; source_cell_text keeps the raw stored text. Pending independent review. Independent review 2026-10-09: value and identity match the source. Field: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Format: curator_factual_receipt Extraction artifact SHA-256: |
| Reported result 0.888 Individual claims | DRAGEN supplementary tables 1–17 Supplementary Tables XLSX sheet 'S4 CNV benchmarking', F8; row [10,000-20,0000); column DRAGEN4.2 (CNV+SV) Recall Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: MOESM3 XLSX retrieved 2026-10-07 | source checked ["source-hash-verification","deterministic-table-parse","independent-cell-check"] · 2026-10-09 author reported Audit detailsExtracted by deterministic parse of the pinned XLSX cell XML (scripts in the batch retrieval log), with row and column labels asserted. printed_value is the shortest round-trip decimal of the stored cell value; source_cell_text keeps the raw stored text. Pending independent review. Independent review 2026-10-09: value and identity match the source. Field: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Format: curator_factual_receipt Extraction artifact SHA-256: |
Sources and history
Release 2026-10-09-9307685239b3 · Record review: source checked
2 source records and release history
- Comprehensive genome analysis and variant detection at scale using DRAGEN · Original source · 2024-10-25 version of record; code-availability correction 2024-12-02; July 2025 issue
- DRAGEN supplementary tables 1–17 · Original source · MOESM3 XLSX retrieved 2026-10-07
Technical metadata and extraction receipts
Stable ID: cnv-20261009-result-behera2024-dragen42-cnv-sv-10-20kb-recall
- metric
- recall
- metric qualifier
- deletions, [10,000-20,0000) bp
- metric direction
- higher
- unit
- fraction
- printed value
- 0.888
- numeric value
- 0.888
- source locator
- Supplementary Tables XLSX sheet 'S4 CNV benchmarking', F8; row [10,000-20,0000); column DRAGEN4.2 (CNV+SV) Recall
- missing metadata
- uncertainty: reason: unreported
- review
- method: source-hash-verification; deterministic-table-parse; independent-cell-check; method note: Re-downloaded the artifact and matched its SHA-256. Read the cell with a separate stdlib OOXML/XML parser written for this review (DRAGEN supplement sheet 'S4 CNV benchmarking'); the extractor's scripts were not imported or run. Checked printed and numeric value (shortest round-trip decimal of the stored double), raw cell text, metric, qualifier, unit and direction from the row and column headers, and the linked evaluation's configuration and protocol.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: c8d66e8373f22382f1c5e4a576d2c85825a18232a14767d239966bc8ab56c3d9; retrieval url: https://media.springernature.com/original/springer-static/esm/art%3A10.1038%2Fs41587-024-02382-1/MediaObjects/41587_2024_2382_MOESM3_ESM.xlsx; note: Extracted by deterministic parse of the pinned XLSX cell XML (scripts in the batch retrieval log), with row and column labels asserted. printed_value is the shortest round-trip decimal of the stored cell value; source_cell_text keeps the raw stored text. Pending independent review. Independent review 2026-10-09: value and identity match the source.
- raw xml value
- 0.888
Related records
- evaluation: DRAGEN4.2 (CNV+SV) deletion [10,000-20,0000)