Result

0.948 AUC

MegSite + ESM3 · AUC · DNA-129_Test

Tested pipeline: MegSite + ESM3
Task: DNA-binding residue prediction
Dataset: DNA-129_Test
Procedure: ESM3 multimodal embedding ablation in MegSite
Evaluation: MegSite + ESM3: DNA-binding residue prediction
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: independent test
Adaptation: Not reported
Scoring implementation: Not reported

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Access requirements and official instructions: DNA-binding residue prediction

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

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Evidence table

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 0.948 Individual claims	MegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model Original source ↗ Table 2, DNA-129_Test / ESM3 row, AUC column Version: journal full text in PMC Retrieved: 2026-09-16T10:38:57.558213+00:00	source checked independent ai table review · 2026-09-16T10:38:57.558213+00:00 author reported Audit details Resolved DNA-129_Test row group and ESM3 row. AUC is 0.948; the next numeric cell 0.582 is AP. Caption states an embedding comparison within MegSite. Field: `attributes.printed_value` Claim: claim-b2-megsite-2025 Source artifact SHA-256: `10d13122331813243d83b84fe6f9294eac7e7c03cde082ebed276191ac41089c` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `10d13122331813243d83b84fe6f9294eac7e7c03cde082ebed276191ac41089c` Extraction artifact

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Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release history

MegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Original source · journal full text in PMC

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Technical metadata and extraction receipts

Stable ID: b2-megsite-2025

areas: proteins-complexes
tasks: DNA-binding residue prediction
printed value: 0.948
numeric value: 0.948
metric: AUC
metric direction: unknown
unit: fraction
uncertainty: Not reported
source locator: Table 2, DNA-129_Test / ESM3 row, AUC column
review: method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558213+00:00; notes: Resolved DNA-129_Test row group and ESM3 row. AUC is 0.948; the next numeric cell 0.582 is AP. Caption states an embedding comparison within MegSite.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.948.; artifact sha256: 10d13122331813243d83b84fe6f9294eac7e7c03cde082ebed276191ac41089c; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12496013/fullTextXML
legacy id: b2-megsite-2025
legacy row: id: b2-megsite-2025; paper id: megsite-2025; domain id: proteins-complexes; task: DNA-binding residue prediction; model: MegSite + ESM3; model version: not stated in table; dataset: DNA-129_Test; dataset version: Not reported; split: independent test; metric: AUC; value: 0.948; unit: fraction; uncertainty: Not reported; protocol: ESM3 multimodal embedding ablation in MegSite; source locator: Table 2, DNA-129_Test / ESM3 row, AUC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12496013/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
missing metadata: dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: MegSite + ESM3: DNA-binding residue prediction
subject: Reported AUC for MegSite + ESM3

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