Result

0.988 AUROC

GSMFormer-PPI + ProstT5 · AUROC · paper PPI test set

Tested pipeline: GSMFormer-PPI + ProstT5
Task: protein-protein interaction prediction
Dataset: paper PPI test set
Procedure: ProstT5 embeddings as graph node features
Evaluation: GSMFormer-PPI + ProstT5: protein-protein interaction prediction
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedMultimodal graph, surface, and language-based model for protein protein interaction prediction · Table 6, ProstT5 embedding row, AUROC column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split: test set
Adaptation: Not reported
Scoring implementation: Not reported

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Access requirements and official instructions: protein-protein interaction prediction

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Evidence

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1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statement	Original source and location	Review and provenance
attributes.printed_value 0.988 Individual claims	Multimodal graph, surface, and language-based model for protein protein interaction prediction Original source ↗ Table 6, ProstT5 embedding row, AUROC column Version: journal full text in PMC Retrieved: 2026-09-16T10:38:57.558212+00:00	source checked independent ai table review · 2026-09-16T10:38:57.558212+00:00 author reported Audit details Matched ProstT5 embedding row and AUROC column, 0.988. Caption explicitly describes GSMFormer-PPI using embeddings as node features, not standalone ProstT5 prediction. Field: `attributes.printed_value` Claim: claim-b2-gsmformer-ppi-2026 Source artifact SHA-256: `9b364b5d73d16f2787f93f78f17dbe98b954ab9c2c64c1df960eec2e615eb3b4` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact Extraction artifact SHA-256: `9b364b5d73d16f2787f93f78f17dbe98b954ab9c2c64c1df960eec2e615eb3b4` Extraction artifact

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Release 2026-09-29-06401fd5b220 · Record review: source checked

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Multimodal graph, surface, and language-based model for protein protein interaction prediction · Original source · journal full text in PMC

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Technical metadata and extraction receipts

Stable ID: b2-gsmformer-ppi-2026

areas: proteins-complexes
tasks: protein-protein interaction prediction
printed value: 0.988
numeric value: 0.988
metric: AUROC
metric direction: unknown
unit: fraction
uncertainty: Not reported
source locator: Table 6, ProstT5 embedding row, AUROC column
review: method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558212+00:00; notes: Matched ProstT5 embedding row and AUROC column, 0.988. Caption explicitly describes GSMFormer-PPI using embeddings as node features, not standalone ProstT5 prediction.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.988.; artifact sha256: 9b364b5d73d16f2787f93f78f17dbe98b954ab9c2c64c1df960eec2e615eb3b4; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12873117/fullTextXML
legacy id: b2-gsmformer-ppi-2026
legacy row: id: b2-gsmformer-ppi-2026; paper id: gsmformer-ppi-2026; domain id: proteins-complexes; task: protein-protein interaction prediction; model: GSMFormer-PPI + ProstT5; model version: not stated in table; dataset: paper PPI test set; dataset version: Not reported; split: test set; metric: AUROC; value: 0.988; unit: fraction; uncertainty: Not reported; protocol: ProstT5 embeddings as graph node features; source locator: Table 6, ProstT5 embedding row, AUROC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12873117/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
missing metadata: dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract

Related records

evaluation: GSMFormer-PPI + ProstT5: protein-protein interaction prediction
subject: Reported AUROC for GSMFormer-PPI + ProstT5

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