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Result

0.575 binary F1

ERNIE-RNA · binary F1 · bpRNA-new

Tested configuration
ERNIE-RNA
Task
RNA secondary-structure prediction
Dataset
bpRNA-new
Procedure
zero-shot attention-derived base-pair prediction
Evaluation
ERNIE-RNA: RNA secondary-structure prediction
Coverage
scored: unreported; eligible: unreported
Uncertainty
Not reported
Evidence
Author-reported evaluation · source checkedERNIE-RNA: an RNA language model with structure-enhanced representations · Table 2, ERNIE-RNA zero-shot row, bpRNA-new F1-Score (binary) column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split
cross-family test
Adaptation
Not reported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.printed_value
0.575
Individual claims
ERNIE-RNA: an RNA language model with structure-enhanced representations

Original source ↗

Table 2, ERNIE-RNA zero-shot row, bpRNA-new F1-Score (binary) column

Version: journal full text in PMC
Retrieved: 2026-09-16T10:38:57.558206+00:00

source checked

independent ai table review · 2026-09-16T10:38:57.558206+00:00

author reported

Audit details

Resolved bpRNA-new as the first three-column dataset group and F1-Score (binary) as its third metric. ERNIE-RNA zero shot is 86M and reports 0.575; RNA3DB-2D F1 is instead 0.542.

Field: attributes.printed_value

Claim: claim-b2-ernie-rna-2025

Source artifact SHA-256: 0bd1d4b3cbf5d59d452cec4864614947861efcee050ba07e7de395cd90630047

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Extraction artifact SHA-256: 0bd1d4b3cbf5d59d452cec4864614947861efcee050ba07e7de395cd90630047

Extraction artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: b2-ernie-rna-2025

areas
rna-transcriptomes
tasks
RNA secondary-structure prediction
printed value
0.575
numeric value
0.575
metric
binary F1
metric direction
unknown
unit
fraction
uncertainty
Not reported
source locator
Table 2, ERNIE-RNA zero-shot row, bpRNA-new F1-Score (binary) column
review
method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558206+00:00; notes: Resolved bpRNA-new as the first three-column dataset group and F1-Score (binary) as its third metric. ERNIE-RNA zero shot is 86M and reports 0.575; RNA3DB-2D F1 is instead 0.542.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.575.; artifact sha256: 0bd1d4b3cbf5d59d452cec4864614947861efcee050ba07e7de395cd90630047; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12627772/fullTextXML
legacy id
b2-ernie-rna-2025
legacy row
id: b2-ernie-rna-2025; paper id: ernie-rna-2025; domain id: rna-transcriptomes; task: RNA secondary-structure prediction; model: ERNIE-RNA; model version: 86M; dataset: bpRNA-new; dataset version: Not reported; split: cross-family test; metric: binary F1; value: 0.575; unit: fraction; uncertainty: Not reported; protocol: zero-shot attention-derived base-pair prediction; source locator: Table 2, ERNIE-RNA zero-shot row, bpRNA-new F1-Score (binary) column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12627772/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
missing metadata
dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
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