rewire.itbenchmarks
Result

0.657 MCC

ERNIE-RNA + CoBRA · MCC · CoBRA compound-binding test set

Tested pipeline
ERNIE-RNA + CoBRA
Task
RNA compound-binding site prediction
Dataset
CoBRA compound-binding test set
Procedure
ERNIE-RNA embedding with TCL focal loss
Evaluation
ERNIE-RNA + CoBRA: RNA compound-binding site prediction
Coverage
scored: unreported; eligible: unreported
Uncertainty
Not reported
Evidence
Author-reported evaluation · source checkedCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Reproduction

Split
test set
Adaptation
Not reported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.printed_value
0.657
Individual claims
CoBRA: compound binding site prediction using RNA language model

Original source ↗

Table 2, ERNIE-RNA / TCL focal row, MCC column

Version: journal full text in PMC
Retrieved: 2026-09-16T10:38:57.558197+00:00

source checked

independent ai table review · 2026-09-16T10:38:57.558197+00:00

author reported

Audit details

Matched ERNIE-RNA jointly with TCL focal loss, then the MCC column. Table 2 explicitly reports test-set models. The cell is 0.657, distinct from AUROC 0.868.

Field: attributes.printed_value

Claim: claim-b2-cobra-rna-binding-2026

Source artifact SHA-256: 8c6a6f00f5fa5f62acf301a66e9e6fa9ef11c7a05ad9b7447d2ade2ce8eba793

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Extraction artifact SHA-256: 8c6a6f00f5fa5f62acf301a66e9e6fa9ef11c7a05ad9b7447d2ade2ce8eba793

Extraction artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: b2-cobra-rna-binding-2026

areas
rna-transcriptomes
tasks
RNA compound-binding site prediction
printed value
0.657
numeric value
0.657
metric
MCC
metric direction
unknown
unit
unitless
uncertainty
Not reported
source locator
Table 2, ERNIE-RNA / TCL focal row, MCC column
review
method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558197+00:00; notes: Matched ERNIE-RNA jointly with TCL focal loss, then the MCC column. Table 2 explicitly reports test-set models. The cell is 0.657, distinct from AUROC 0.868.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.657.; artifact sha256: 8c6a6f00f5fa5f62acf301a66e9e6fa9ef11c7a05ad9b7447d2ade2ce8eba793; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12790621/fullTextXML
legacy id
b2-cobra-rna-binding-2026
legacy row
id: b2-cobra-rna-binding-2026; paper id: cobra-rna-binding-2026; domain id: rna-transcriptomes; task: RNA compound-binding site prediction; model: ERNIE-RNA + CoBRA; model version: not stated in table; dataset: CoBRA compound-binding test set; dataset version: Not reported; split: test set; metric: MCC; value: 0.657; unit: unitless; uncertainty: Not reported; protocol: ERNIE-RNA embedding with TCL focal loss; source locator: Table 2, ERNIE-RNA / TCL focal row, MCC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12790621/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
missing metadata
dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
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