Result

0.926 F-score

DRAGEN CNV+SV deletion1–5kb reported endpoint

Tested configuration: DRAGEN 4.2 CNV+SV configuration
Protocol: HG002 GIAB v0.6 CNV deletion 1–5kb F-score
Dataset: HG002 35× WGS, GIAB SV v0.6 deletion subset
Procedure: amp-protocol-hg002-cnv-1-5kb
Evaluation: DRAGEN CNV+SV deletion1–5kb
Coverage: scored: unreported; eligible: unreported
Uncertainty: Not reported
Evidence: Author-reported evaluation · source checkedComprehensive genome analysis and variant detection at scale using DRAGEN; DRAGEN supplementary tables 1–17 · Supplementary Tables XLSX sheet 'S4 CNV benchmarking', H6; A6=[1,000-5,000), F6=.873 recall, G6=.986 precision; Results CNV paragraph and Fig2f

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.

Reproduction

Split: Single HG002 benchmark sample
Adaptation: Not reported
Scoring implementation: Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Access requirements and official instructions: HG002 GIAB v0.6 CNV deletion 1–5kb F-score

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

2 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-07-1448159e6a81
Property and statement	Original source and location	Review and provenance
Reported result 0.926 Individual claims	Comprehensive genome analysis and variant detection at scale using DRAGEN Original source ↗ Supplementary Tables XLSX sheet 'S4 CNV benchmarking', H6; A6=[1,000-5,000), F6=.873 recall, G6=.986 precision; Results CNV paragraph and Fig2f Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 2024-10-25 version of record; code-availability correction 2024-12-02; July 2025 issue Retrieved: 2026-10-07T12:24:43.812919+00:00	source checked automated source review · 2026-10-07T12:28:51.639798+00:00 author reported Audit details Direct primary-text and OOXML cell inspection. Candidate curation pending parent review; no execution, reproduction or qualified human scientific review. Field: `attributes.printed_value` Source artifact SHA-256: `84abe921f340f9c8d7cf11ddd3cf5adc8e7a034db9d53f0d4e2fe292e94c1a6d` Hash scope: Hash scope not separately documented; inspect source record Format: curator_factual_receipt Inspected artifact
Reported result 0.926 Individual claims	DRAGEN supplementary tables 1–17 Original source ↗ Supplementary Tables XLSX sheet 'S4 CNV benchmarking', H6; A6=[1,000-5,000), F6=.873 recall, G6=.986 precision; Results CNV paragraph and Fig2f Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: MOESM3 XLSX retrieved 2026-10-07 Retrieved: 2026-10-07T12:25:22.006309+00:00	source checked automated source review · 2026-10-07T12:28:51.639798+00:00 author reported Audit details Direct primary-text and OOXML cell inspection. Candidate curation pending parent review; no execution, reproduction or qualified human scientific review. Field: `attributes.printed_value` Source artifact SHA-256: `edf36c4d94f2f68ce26fe2d7edfb0dfdc8e4d1774367ff10551dc32cc280b74e` Hash scope: Hash scope not separately documented; inspect source record Format: curator_factual_receipt Inspected artifact

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Sources and history

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Release 2026-10-07-1448159e6a81 · Record review: source checked

2 source records and release history

Comprehensive genome analysis and variant detection at scale using DRAGEN · Original source · 2024-10-25 version of record; code-availability correction 2024-12-02; July 2025 issue
DRAGEN supplementary tables 1–17 · Original source · MOESM3 XLSX retrieved 2026-10-07

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Technical metadata and extraction receipts

Stable ID: amp-result-dragen-cnv-sv-1-5kb-fscore

areas: dna-genomes
contexts: clinical_research
metric: F-score
metric direction: higher
missing metadata: denominator: Unreported per bin; metric implementation: Matching implementation unextracted; uncertainty: Unreported
numeric value: 0.926
printed value: 0.926
review: method: automated_source_review; notes: Direct primary-text and OOXML cell inspection. Candidate curation pending parent review; no execution, reproduction or qualified human scientific review.; reviewed at: 2026-10-07T12:28:51.639798+00:00; reviewer: Codex AMP methylation/CNV/operations evidence worker
source locator: Supplementary Tables XLSX sheet 'S4 CNV benchmarking', H6; A6=[1,000-5,000), F6=.873 recall, G6=.986 precision; Results CNV paragraph and Fig2f
uncertainty: Not reported
unit: fraction

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evaluation: DRAGEN CNV+SV deletion1–5kb

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