93.7% positive_percent_agreement_initial_blood_culture
Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture reported endpoint
- Tested configuration
- Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture configuration
- Protocol
- Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture protocol
- Dataset
- Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture dataset
- Procedure
- amp-20261007-dna-pathogens-protocol
- Evaluation
- Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture evaluation
- Coverage
- scored: unreported; eligible: unreported
- Uncertainty
- 95% CI 84.5–98.2%
- Evidence
- Author-reported evaluation · source checkedKarius 2019 plasma microbial cfDNA positive agreement with initial blood culture source · Blauwkamp et al. primary article Table 2, PDF page 7, Positive by initial blood culture row: NGS positive 59, NGS negative 4, Agreement 93.7%, 95% CI 84.5–98.2%. Results clinical-validation subsection calls this sensitivity.
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Reproduction
- Split
- Prospective SEP-SEQ clinical cohort, not a model training/test split
- Adaptation
- Not reported
- Scoring implementation
- positive_percent_agreement_initial_blood_culture
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 93.7 Individual claims | Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture source Blauwkamp et al. primary article Table 2, PDF page 7, Positive by initial blood culture row: NGS positive 59, NGS negative 4, Agreement 93.7%, 95% CI 84.5–98.2%. Results clinical-validation subsection calls this sensitivity. Version: Blauwkamp et al., Nature Microbiology 4, 663–674 (2019) | source checked automated source review · 2026-10-07T12:29:33.932238+00:00 author reported Audit detailsCandidate extraction only; parent independent review required. No independent replication or human scientific review. Field: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
View linked audit checks and correction history
Release 2026-10-07-1448159e6a81 · Record review: source checked
1 source records and release history
- Karius 2019 plasma microbial cfDNA positive agreement with initial blood culture source · Original source · Blauwkamp et al., Nature Microbiology 4, 663–674 (2019)
Technical metadata and extraction receipts
Stable ID: amp-20261007-dna-pathogens-result
- areas
- dna-genomes
- method types
- conventional_pipeline
- tasks
- pathogen_detection
- denominator
- 63
- metric
- positive_percent_agreement_initial_blood_culture
- metric direction
- higher
- missing metadata
- None recorded
- numerator
- 59
- numeric value
- 93.7
- printed value
- 93.7
- review
- method: automated_source_review; notes: Candidate extraction only; parent independent review required. No independent replication or human scientific review.; reviewed at: 2026-10-07T12:29:33.932238+00:00; reviewer: Codex pathogens-fragmentomics evidence worker
- source locator
- Blauwkamp et al. primary article Table 2, PDF page 7, Positive by initial blood culture row: NGS positive 59, NGS negative 4, Agreement 93.7%, 95% CI 84.5–98.2%. Results clinical-validation subsection calls this sensitivity.
- uncertainty
- 95% CI 84.5–98.2%
- unit
- percent