SomaticSniper
Somatic SNV caller using joint genotype analysis (Guille et al. 2025 Table 1).
No reviewed evaluations are linked here in this release. See the sources and separately identified configurations below.
Overview
Somatic SNV caller using joint genotype analysis (Guille et al. 2025 Table 1).
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
0 evaluations · 0 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
No evaluations linked in this release.
Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
Use this model
How it works, versions and access
Strengths, limitations and unresolved questions
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
3 source records and release history
- SomaticCombiner: improving the performance of somatic variant calling based on evaluation tests and a consensus approach · Original source · Scientific Reports 10:12898, published 2020-07-30; PMC7393490 full-text XML
- Wang et al. 2020, Supplementary Tables (somatic caller performance) · Original source · 41598_2020_69772_MOESM3_ESM.xlsx (Supplementary Tables S1-S9) as served by the publisher
- A benchmarking study of individual somatic variant callers and voting-based ensembles for whole-exome sequencing · Original source · Briefings in Bioinformatics 26(1):bbae697, published online 2025-01-18; PMC11790059 full-text XML
Technical metadata and extraction receipts
Stable ID: somatic-20261009-method-somaticsniper
- areas
- dna-genomes
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- SomaticSniper
- entity level
- method
- source locator
- Tool lists and table row labels of the cited sources
- missing metadata
- version: reason: inapplicable; note: Family record; versions are on configurations
- access
- Download location listed in Guille et al. 2025 Table 1: https://github.com/genome/somatic-sniper
Related records
- configuration of: SomaticSniper 1.0.5.0 (Guille et al. 2025)
- configuration of: SomaticSniper v1.0.5.0 (Wang et al. 2020)