rewirebio.iobenchmarks
Method

DOCK3.7

Physics-based docking program that pre-samples ligand conformations onto matching spheres in a binding site and scores them by summed receptor-ligand electrostatic and van der Waals energies corrected for context-dependent ligand desolvation.

Results are recorded on linked configurations and versions of this method. Their settings and evaluations are kept separate below.

1 configuration with results

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Evidence

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Evidence table

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Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
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Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: hitdisc-20261022-method-dock37

areas
molecular-interactions
contexts
research
method types
conventional_pipeline
entity level
method
reported name
DOCK3.7
access
Hit lists available from https://lsd.docking.org/ (Data availability); no licence is stated for the program
source locator
Methods 'Molecular docking of Mac1 compounds'; Results 'Co-folding struggles to reliably re-rank docking hit lists'
provenance note
Created from the method description in Kim, Correy, Hall et al. 2026; the DOCK3.7 primary papers were not retrieved.
missing metadata
version: reason: unreported; note: The source names the program as DOCK3.7 but no build or release
review
method: scope-review; automated-source-review; reviewer: claude; reviewer note: Claude review agent, independent of the extraction agent; no human review claimed; date: 2026-10-22; method note: Read the record against the pinned sources and against docs/use-cases.md and docs/record-contract.md.; note: Record checked against the pinned source and the record contract. Transcription checked; not reproduced and not reviewed by a human scientist.; artifact sha256: 9be510b7b0cc152ff56a03c96877bf06b6a6bdeffdb4baecf8e999a6bf155aa6; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13657626/fullTextXML; receipt: data/omics/use-case-coverage-hitdisc-20261022/review.json
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