gnomAD allele frequency as a variant score
Ranks variants by negated gnomAD allele frequency so rarer variants score higher; variants absent from gnomAD get frequency 0.
Results are recorded on linked configurations and versions of this method. Their settings and evaluations are kept separate below.
Results on linked records
This method has no results of its own in this release. One linked record has results. They are not assigned to the underlying method: each record keeps its own settings and evaluations, and its scores are on its own page.
- gnomAD v4.1 genome allele frequency, negated (AlphaGenome Atlas v1) Configuration · configuration of this method · 2 evaluations · 2 results
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How it works, versions and access
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Evidence
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Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
- AlphaGenome Atlas: in silico mutagenesis of the entire human genome (Cheng, Taylor, Nicolaisen et al., medRxiv 2026) · Original source · medRxiv preprint version 1, posted 2026-09-20; full-text PDF with supplementary figures and tables (83 pages)
Technical metadata and extraction receipts
Stable ID: ag-atlas-20261019-method-gnomad-allele-frequency
- areas
- dna-genomes
- contexts
- research
- method types
- conventional_pipeline
- entity level
- method
- reported name
- gnomAD allele frequency
- version
- gnomAD v4.1 genomes
- source locator
- Methods 'Obtaining baseline scores', gnomAD allele frequency paragraph (page 27)
Related records
- configuration of: gnomAD v4.1 genome allele frequency, negated (AlphaGenome Atlas v1)