Arriba evaluation; bounded primary-source AMP candidate.
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Release 2026-10-07-1448159e6a81 · Evidence verified: Not verified
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1 evaluation · 4 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: Arriba | Protocol: EnFusion undiluted Seraseq duplicate benchmark Dataset: Undiluted Seraseq Fusion RNA control, duplicate libraries | 13 mean Seraseq fusions identified fusions · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceConsensus ≥3 callers, with specified filtering and known fusion list rescue; Table 2 displays mean of duplicate undiluted experiments. Only 14 Seraseq fusions are positive; all others counted false positive. Comparators processed by same authors. Aggregation: Not reported Discovery of clinically relevant fusions in pediatric cancer · Table 2, Arriba row, corresponding column (JATS Tab2) |
| Configuration: Arriba | Protocol: EnFusion undiluted Seraseq duplicate benchmark Dataset: Undiluted Seraseq Fusion RNA control, duplicate libraries | 23.5 mean total fusions identified fusions · lower Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceConsensus ≥3 callers, with specified filtering and known fusion list rescue; Table 2 displays mean of duplicate undiluted experiments. Only 14 Seraseq fusions are positive; all others counted false positive. Comparators processed by same authors. Aggregation: Not reported Discovery of clinically relevant fusions in pediatric cancer · Table 2, Arriba row, corresponding column (JATS Tab2) |
| Configuration: Arriba | Protocol: EnFusion undiluted Seraseq duplicate benchmark Dataset: Undiluted Seraseq Fusion RNA control, duplicate libraries | 55.3% precision % · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceConsensus ≥3 callers, with specified filtering and known fusion list rescue; Table 2 displays mean of duplicate undiluted experiments. Only 14 Seraseq fusions are positive; all others counted false positive. Comparators processed by same authors. Aggregation: Not reported Discovery of clinically relevant fusions in pediatric cancer · Table 2, Arriba row, corresponding column (JATS Tab2) |
| Configuration: Arriba | Protocol: EnFusion undiluted Seraseq duplicate benchmark Dataset: Undiluted Seraseq Fusion RNA control, duplicate libraries | 92.9% sensitivity % · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Independent external evaluation · Source checkedMethods, coverage and sourceConsensus ≥3 callers, with specified filtering and known fusion list rescue; Table 2 displays mean of duplicate undiluted experiments. Only 14 Seraseq fusions are positive; all others counted false positive. Comparators processed by same authors. Aggregation: Not reported Discovery of clinically relevant fusions in pediatric cancer · Table 2, Arriba row, corresponding column (JATS Tab2) |
Source checking is not independent reproduction. Release 2026-10-07-1448159e6a81.
Consensus ≥3 callers, with specified filtering and known fusion list rescue; Table 2 displays mean of duplicate undiluted experiments. Only 14 Seraseq fusions are positive; all others counted false positive. Comparators processed by same authors.
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One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
17 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.adaptation Not reported Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.aggregation duplicate experiment averages Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.budget Not reported Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.dataset_version Not reported Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.inputs paired-end RNA-seq reads Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.metric_implementation Not reported Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.population 14 synthetic fusions; duplicate experiments Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.protocol_id Not reported Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | missing or unspecified No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.split optimization/reference control Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.origin independent_paper Context-only references | Discovery of clinically relevant fusions in pediatric cancer No field-specific location recorded Version: Europe PMC fullTextXML retrieved 2026-10-07T12:25:20.810843+00:00 | not individually reviewed No individual claim review recorded independent paper Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
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Release 2026-10-07-1448159e6a81 · Record review: source checked
Stable ID: amp-oncology-rna-20261007-issue-11-eval-arriba