rewirebio.iobenchmarks
Dataset

Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)

Exome datasets that local analysis had not resolved, pooled across 42 research groups and four European Reference Networks.

Research readiness

These checks assess whether the evidence supports a reproducible investigation. A source-checked score alone does not meet these requirements.

Release 2026-10-10-7fcc3e48a123 · Evidence verified: Not verified

Evidence incomplete

Replay metrics

Exact outcomes, predictions, identifiers and evaluator are connected.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing

Verified: Not verified

Evidence incomplete

Investigate discrepancies

Replay evidence includes annotations and an assessment of dependence. Unknown independence permits descriptive analysis only.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • metric replay: verification is missing
  • annotations: verification is missing
  • dependence: verification is missing

Verified: Not verified

Evidence incomplete

Run locally

A pinned recipe describes the inputs, environment and resource requirements.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • recipe pinned: verification is missing
  • resource estimate: verification is missing

Verified: Not verified

Evidence incomplete

Validate independently

Separate data and exposure records support an independent test.

Missing or unresolved evidence

  • No verified artifact manifest is linked to this exact record.
  • artifact hashes: verification is missing
  • join integrity: verification is missing
  • score semantics: verification is missing
  • independent validation: verification is missing
  • overlap checked: verification is missing

Verified: Not verified

Readiness describes the evidence in this release. Availability on your computer is checked separately when an investigation runs. Existing data exposure can prevent independent validation even when files are available.

Artifacts and reproduction

No verified artifact manifest is connected to this record yet. The gaps above identify what is needed before analysis can begin.

Read reviewed discrepancy investigations

Evaluation results

3 evaluations · 63 results. Different protocols are not a single leaderboard.

Filter evaluations

Applied filters: All linked evaluations

Exact evaluated configurations and original reported results
Tested configurationProtocol and datasetFindingEvidence and details
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
28 (2) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '>4' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
28 (2) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '>4' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
283 (206) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '0' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
283 (206) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '0' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
1,203 (64) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '1' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
1,203 (64) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '1' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
99 (99) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '2' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
99 (99) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '2' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
776 (29) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '3' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
776 (29) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '3' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
145 (1) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '4' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
145 (1) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column '4' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
248 (68) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column 'Long' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
248 (68) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column 'Long' (value in brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
2.78 count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5) · Supplementary Table 4 (page with heading 'Supplementary Table 4'), row 'ClinCNV', column 'all CNVs returned for interpretation'
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
1.56 count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5) · Supplementary Table 4 (page with heading 'Supplementary Table 4'), row 'ClinCNV', column 'deletions returned for interpretation'
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
1.22 count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5) · Supplementary Table 4 (page with heading 'Supplementary Table 4'), row 'ClinCNV', column 'duplications returned for interpretation'
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
0,44 proportion
fraction · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5) · Supplementary Table 4 (page with heading 'Supplementary Table 4'), row 'ClinCNV', column 'share of this caller's calls that are duplications'
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
0,35 proportion
fraction · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5) · Supplementary Table 4 (page with heading 'Supplementary Table 4'), row 'ClinCNV', column 'share of all CNV calls contributed by this caller'
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
2,782 (469) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column 'Total' (value outside brackets)
Configuration: ClinCNV in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
2,782 (469) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Author-reported evaluation · Source checked
Methods, coverage and source

ClinCNV: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'ClinCNV', column 'Total' (value in brackets)
Configuration: Conifer in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
0 (0) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Conifer: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'Conifer', column '>4' (value outside brackets)
Configuration: Conifer in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
0 (0) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Conifer: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'Conifer', column '>4' (value in brackets)
Configuration: Conifer in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
5 (4) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Conifer: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'Conifer', column '0' (value outside brackets)
Configuration: Conifer in the Solve-RD exome CNV reanalysis (Demidov et al. 2024)Protocol: CNV calls returned to clinical experts per caller after filtering, Solve-RD exome reanalysis (Demidov et al. 2024 Table 1, Supplementary Table 4)
Dataset: Solve-RD unsolved rare-disease exomes reanalysed for CNVs (Demidov et al. 2024)
5 (4) count
count · unknown

Uncertainty: Not reported by the source

Coverage: Not reported scored / Not reported eligible

Independent external evaluation · Source checked
Methods, coverage and source

Conifer: CNV calls returned for interpretation (Solve-RD)

rare-reanalysis-20261009-protocol-demidov2024-cnv-calls-for-interpretation

Aggregation: Not reported

Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses · Table 1, row 'Conifer', column '0' (value in brackets)

Source checking is not independent reproduction. Release 2026-10-10-7fcc3e48a123.

Dataset and evaluation context

A dataset supplies biological observations. The evaluation protocol defines how those observations are split, used and scored.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-7fcc3e48a123
Property and statementOriginal source and locationReview and provenance
attributes.denominator
5757
Context-only references
Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: npj Genomic Medicine 9:49, published online 2024-10-26; PMC11513043 full-text XML
Retrieved: 2026-10-09T20:40:13Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.denominator

Source artifact SHA-256: 8bd0d50c0f3a1018c1f5ada9088a748d27d787eb5598e9857d2ddede85854ce6

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.denominator
5757
Context-only references
Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5)

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41525_2024_436_MOESM1_ESM.pdf from the Europe PMC supplementary bundle (hash is of the PDF; the bundle zip is rebuilt per request)
Retrieved: 2026-10-09T20:40:40Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.denominator

Source artifact SHA-256: 521480b4999903af5acfac1c33c9453ce1f1e5a8b641a1682c5e96e11aa577ef

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.population
9171 exome datasets from 5757 families (6143 affected individuals) affected by a rare disease, generated with 28 enrichment kits by 42 research groups; each group had already analysed its data without a diagnosis.
Context-only references
Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: npj Genomic Medicine 9:49, published online 2024-10-26; PMC11513043 full-text XML
Retrieved: 2026-10-09T20:40:13Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.population

Source artifact SHA-256: 8bd0d50c0f3a1018c1f5ada9088a748d27d787eb5598e9857d2ddede85854ce6

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.population
9171 exome datasets from 5757 families (6143 affected individuals) affected by a rare disease, generated with 28 enrichment kits by 42 research groups; each group had already analysed its data without a diagnosis.
Context-only references
Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5)

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41525_2024_436_MOESM1_ESM.pdf from the Europe PMC supplementary bundle (hash is of the PDF; the bundle zip is rebuilt per request)
Retrieved: 2026-10-09T20:40:40Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.population

Source artifact SHA-256: 521480b4999903af5acfac1c33c9453ce1f1e5a8b641a1682c5e96e11aa577ef

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Abstract; Introduction paragraph 5; Supplementary Table 3
Context-only references
Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: npj Genomic Medicine 9:49, published online 2024-10-26; PMC11513043 full-text XML
Retrieved: 2026-10-09T20:40:13Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 8bd0d50c0f3a1018c1f5ada9088a748d27d787eb5598e9857d2ddede85854ce6

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Abstract; Introduction paragraph 5; Supplementary Table 3
Context-only references
Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5)

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41525_2024_436_MOESM1_ESM.pdf from the Europe PMC supplementary bundle (hash is of the PDF; the bundle zip is rebuilt per request)
Retrieved: 2026-10-09T20:40:40Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 521480b4999903af5acfac1c33c9453ce1f1e5a8b641a1682c5e96e11aa577ef

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.split
No split; analysed in 28 batches by enrichment kit
Context-only references
Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: npj Genomic Medicine 9:49, published online 2024-10-26; PMC11513043 full-text XML
Retrieved: 2026-10-09T20:40:13Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.split

Source artifact SHA-256: 8bd0d50c0f3a1018c1f5ada9088a748d27d787eb5598e9857d2ddede85854ce6

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.split
No split; analysed in 28 batches by enrichment kit
Context-only references
Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5)

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41525_2024_436_MOESM1_ESM.pdf from the Europe PMC supplementary bundle (hash is of the PDF; the bundle zip is rebuilt per request)
Retrieved: 2026-10-09T20:40:40Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.split

Source artifact SHA-256: 521480b4999903af5acfac1c33c9453ce1f1e5a8b641a1682c5e96e11aa577ef

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.version
Solve-RD exome data as analysed in Demidov et al. 2024
Context-only references
Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: npj Genomic Medicine 9:49, published online 2024-10-26; PMC11513043 full-text XML
Retrieved: 2026-10-09T20:40:13Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.version

Source artifact SHA-256: 8bd0d50c0f3a1018c1f5ada9088a748d27d787eb5598e9857d2ddede85854ce6

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.version
Solve-RD exome data as analysed in Demidov et al. 2024
Context-only references
Demidov et al. 2024, Supplementary Information (Supplementary Tables 1-5)

Original source ↗

Abstract; Introduction paragraph 5; Supplementary Table 3

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 41525_2024_436_MOESM1_ESM.pdf from the Europe PMC supplementary bundle (hash is of the PDF; the bundle zip is rebuilt per request)
Retrieved: 2026-10-09T20:40:40Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.version

Source artifact SHA-256: 521480b4999903af5acfac1c33c9453ce1f1e5a8b641a1682c5e96e11aa577ef

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-10-7fcc3e48a123 · Record review: source checked

2 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: rare-reanalysis-20261009-data-demidov2024-solverd-unsolved-exomes

areas
dna-genomes
contexts
clinical_research
version
Solve-RD exome data as analysed in Demidov et al. 2024
population
9171 exome datasets from 5757 families (6143 affected individuals) affected by a rare disease, generated with 28 enrichment kits by 42 research groups; each group had already analysed its data without a diagnosis.
split
No split; analysed in 28 batches by enrichment kit
denominator
5757
source locator
Abstract; Introduction paragraph 5; Supplementary Table 3
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