negative_definition: structural-20261009-protocol-smorodina2026-vhh-cognate-vs-shuffled
Descriptive fact transcribed from the pinned source.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
6 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field negative_definition Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
| attributes.source_locator Results P9 Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
| attributes.value The source states: 'we assume that VHHs and antigens of “shuffled complexes” are non-binders'. Negatives are therefore pairings assumed not to bind, not pairings shown not to bind. Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
| description Descriptive fact transcribed from the pinned source. Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
| Relationship: subject structural-20261009-protocol-smorodina2026-vhh-cognate-vs-shuffled Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
| name negative_definition: structural-20261009-protocol-smorodina2026-vhh-cognate-vs-shuffled Context-only references | Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores Results P9 Version: bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: JATS XML parse (xml.etree), by extract/extract_structural.py |
Sources and history
Release 2026-10-10-6e93f504adfc · Record review: source checked
1 source records and release history
- Structural Plausibility Without Binding Specificity: Limits of AI-Based Antibody-Antigen Structure Prediction Confidence Scores · Original source · bioRxiv version 1, posted 2026-03-03; Europe PMC preprint full text PPR1221387 (manuscript EMS215481); not peer reviewed
Technical metadata and extraction receipts
Stable ID: structural-20261009-claim-smorodina2026-shuffled-negatives
- field
- negative_definition
- value
- The source states: 'we assume that VHHs and antigens of “shuffled complexes” are non-binders'. Negatives are therefore pairings assumed not to bind, not pairings shown not to bind.
- source locator
- Results P9
- review
- method: transcription; reviewer: claude; date: 2026-10-09; reviewer note: Claude (Opus 5.5) extraction agent; extraction record, not an independent review; artifact sha256: 0ad24054d98fd1888fa8bf3120f76e22f7bf6b1965261b16f045986d72c50732; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PPR1221387/fullTextXML; note: Hand transcription from the source text. Pending independent review.