rewirebio.iobenchmarks
Evidence claim

population_detail: regulatory-variant-20261009-protocol-manzo2025-k562-pearson

Descriptive fact transcribed from the pinned source, added in independent review.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-6e93f504adfc
Property and statementOriginal source and locationReview and provenance
attributes.field
population_detail
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Table 1 caption; Table 4
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.value
Table 1 header gives K562 19,321 and HepG2 16,255 SNPs; Table 4 lists K562 datasets of 19,237 raQTLs and 2,756 variants, and HepG2 datasets of 14,183 raQTLs, one SORT1 enhancer (about 600 bp) and 284 SNPs. The K562 datasets sum to 21,993. NPC (14,042) and HeLa (1,962 + 1,614 + 1,665 = 5,241) agree with Table 4. No filtering step explaining the K562 and HepG2 counts is stated.
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Descriptive fact transcribed from the pinned source, added in independent review.
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
regulatory-variant-20261009-protocol-manzo2025-k562-pearson
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:regulatory-variant-20261009-protocol-manzo2025-k562-pearson

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
population_detail: regulatory-variant-20261009-protocol-manzo2025-k562-pearson
Context-only references
Comparative Analysis of Deep Learning Models for Predicting Causative Regulatory Variants

Original source ↗

Table 1 caption; Table 4

Version: Genes 16(10):1223, published 2025-10-15; PMC12562713 full-text XML
Retrieved: 2026-10-09T21:04:27Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-10-6e93f504adfc · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: regulatory-variant-20261009-claim-manzo2025-snp-counts

field
population_detail
value
Table 1 header gives K562 19,321 and HepG2 16,255 SNPs; Table 4 lists K562 datasets of 19,237 raQTLs and 2,756 variants, and HepG2 datasets of 14,183 raQTLs, one SORT1 enhancer (about 600 bp) and 284 SNPs. The K562 datasets sum to 21,993. NPC (14,042) and HeLa (1,962 + 1,614 + 1,665 = 5,241) agree with Table 4. No filtering step explaining the K562 and HepG2 counts is stated.
source locator
Table 1 caption; Table 4
review
method: source-hash-verification; ai-assisted-source-review; method note: Re-downloaded the article XML, matched its SHA-256 and read the author list, references and cited text with the reviewer's own parser.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: c49e7cef821d7c1a7966db9922b58c2f51d852df13f5cdc3969bf54818e5ed9e; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12562713/fullTextXML; note: Added by the independent reviewer.
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