rewire.itbenchmarks
Evidence claim

ESM-2 650M embeddings + classifier: uses model ESM-2

Source describes ESM-2 as an encoder/backbone/component of the evaluated estimator. Preserve the composite method as uses_model, not a family-equivalent ESM-2 score.

Evidence

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Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.field
links:uses_model:discovery-model-esm-2
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.target_id
discovery-model-esm-2
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.target_id

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Source describes ESM-2 as an encoder/backbone/component of the evaluated estimator. Preserve the composite method as uses_model, not a family-equivalent ESM-2 score.
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
reported-model-4921459942b45f
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:reported-model-4921459942b45f

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
ESM-2 650M embeddings + classifier: uses model ESM-2
Context-only references
The Accurate Prediction of Antibody Deamidations by Combining High-Throughput Automated Peptide Mapping and Protein Language Model-Based Deep Learning

Original source ↗

Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction

Version: journal full text in PMC
Retrieved: 2026-09-16T10:33:38.478Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: aa049f6d78e29540ba902a0d3b7f53d49e9833e4dad9869f79ac27664e8c150b

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: model-evaluation-identity-c3b2ed7682cff8b849f2

areas
proteins-complexes
field
links:uses_model:discovery-model-esm-2
target id
discovery-model-esm-2
source locator
Section 3.2 The Use of ESM-2 Embedding for Deamidation Site Prediction
review
method: automated_source_review; date: 2026-09-23; note: Source review establishes this relationship only. Exact evaluated configurations and original numerical review status remain unchanged. Source describes ESM-2 as an encoder/backbone/component of the evaluated estimator. Preserve the composite method as uses_model, not a family-equivalent ESM-2 score.
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