DNABERT-2†: uses model DNABERT-2
Genome-scanning/postprocessing pipeline uses DNABERT-2; its pipeline score is not an isolated backbone evaluation.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
12 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field links:uses_model:discovery-model-dnabert-2 Context-only references | MAGICS-LAB/DNABERT_2: README.md LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.field links:uses_model:discovery-model-dnabert-2 Context-only references | LAMBDA: A Prophage Detection Benchmark for Genomic Language Models LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC13041943.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Context-only references | MAGICS-LAB/DNABERT_2: README.md LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.source_locator LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Context-only references | LAMBDA: A Prophage Detection Benchmark for Genomic Language Models LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC13041943.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.target_id discovery-model-dnabert-2 Context-only references | MAGICS-LAB/DNABERT_2: README.md LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.target_id discovery-model-dnabert-2 Context-only references | LAMBDA: A Prophage Detection Benchmark for Genomic Language Models LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC13041943.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description Genome-scanning/postprocessing pipeline uses DNABERT-2; its pipeline score is not an isolated backbone evaluation. Context-only references | MAGICS-LAB/DNABERT_2: README.md LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| description Genome-scanning/postprocessing pipeline uses DNABERT-2; its pipeline score is not an isolated backbone evaluation. Context-only references | LAMBDA: A Prophage Detection Benchmark for Genomic Language Models LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC13041943.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: subject paper-model-369c31a2f0b608a34a Context-only references | MAGICS-LAB/DNABERT_2: README.md LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Relationship: subject paper-model-369c31a2f0b608a34a Context-only references | LAMBDA: A Prophage Detection Benchmark for Genomic Language Models LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC13041943.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
2 source records and release history
- LAMBDA: A Prophage Detection Benchmark for Genomic Language Models · Original source · PMC13041943.1
- MAGICS-LAB/DNABERT_2: README.md · Original source · f25bed9ee20db966dff39e5c1571249d04e36404
Technical metadata and extraction receipts
Stable ID: model-evaluation-identity-490189bb602fa1fa4043
- areas
- microbes-communities
- tasks
- Genome-wide prophage detection
- field
- links:uses_model:discovery-model-dnabert-2
- target id
- discovery-model-dnabert-2
- source locator
- LAMBDA Table 1 DNABERT-2 and Table 5 DNABERT-2 dagger; genome scanning and filtering methods | Existing reviewed locator: Table 5., row DNABERT-2†, column Precision; XML row18 column2
- review
- method: automated_source_review; date: 2026-09-23; note: Source review establishes this relationship only. Exact evaluated configurations and original numerical review status remain unchanged. Genome-scanning/postprocessing pipeline uses DNABERT-2; its pipeline score is not an isolated backbone evaluation.
Related records
- subject: DNABERT-2†