rewire.itbenchmarks
Evidence claim

ProkBERT-mini-c: family ProkBERT

Catalog model explicitly describes the microbial encoder family including mini, mini-c and mini-long. Preserve paper-specific variant and pipeline identity.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

12 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-29-06401fd5b220
Property and statementOriginal source and locationReview and provenance
attributes.field
links:family:catalog-model-prokbert
Context-only references
nbrg-ppcu/prokbert: README.md

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 8670ae92b816cff158a0b85647a8dea122e251eb
Retrieved: 2026-09-16T19:46:19.913949+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 29de39c6ad006ce704ab14240cfd97af93da411fb63ec89ebe499c2646928cfc

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

attributes.field
links:family:catalog-model-prokbert
Context-only references
ProkBERT family: genomic language models for microbiome applications

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC10810988.1
Retrieved: 2026-09-17T07:56:14.890826+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.source_locator
Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1
Context-only references
nbrg-ppcu/prokbert: README.md

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 8670ae92b816cff158a0b85647a8dea122e251eb
Retrieved: 2026-09-16T19:46:19.913949+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 29de39c6ad006ce704ab14240cfd97af93da411fb63ec89ebe499c2646928cfc

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

attributes.source_locator
Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1
Context-only references
ProkBERT family: genomic language models for microbiome applications

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC10810988.1
Retrieved: 2026-09-17T07:56:14.890826+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.target_id
catalog-model-prokbert
Context-only references
nbrg-ppcu/prokbert: README.md

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 8670ae92b816cff158a0b85647a8dea122e251eb
Retrieved: 2026-09-16T19:46:19.913949+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.target_id

Source artifact SHA-256: 29de39c6ad006ce704ab14240cfd97af93da411fb63ec89ebe499c2646928cfc

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

attributes.target_id
catalog-model-prokbert
Context-only references
ProkBERT family: genomic language models for microbiome applications

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC10810988.1
Retrieved: 2026-09-17T07:56:14.890826+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.target_id

Source artifact SHA-256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

description
Catalog model explicitly describes the microbial encoder family including mini, mini-c and mini-long. Preserve paper-specific variant and pipeline identity.
Context-only references
nbrg-ppcu/prokbert: README.md

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 8670ae92b816cff158a0b85647a8dea122e251eb
Retrieved: 2026-09-16T19:46:19.913949+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 29de39c6ad006ce704ab14240cfd97af93da411fb63ec89ebe499c2646928cfc

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

description
Catalog model explicitly describes the microbial encoder family including mini, mini-c and mini-long. Preserve paper-specific variant and pipeline identity.
Context-only references
ProkBERT family: genomic language models for microbiome applications

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC10810988.1
Retrieved: 2026-09-17T07:56:14.890826+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: subject
paper-model-779b487305cf463659
Context-only references
nbrg-ppcu/prokbert: README.md

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 8670ae92b816cff158a0b85647a8dea122e251eb
Retrieved: 2026-09-16T19:46:19.913949+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:paper-model-779b487305cf463659

Source artifact SHA-256: 29de39c6ad006ce704ab14240cfd97af93da411fb63ec89ebe499c2646928cfc

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Relationship: subject
paper-model-779b487305cf463659
Context-only references
ProkBERT family: genomic language models for microbiome applications

Original source ↗

Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC10810988.1
Retrieved: 2026-09-17T07:56:14.890826+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:paper-model-779b487305cf463659

Source artifact SHA-256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-29-06401fd5b220 · Record review: source checked

2 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: model-evaluation-identity-3772d753b84d3704803c

areas
microbes-communities
tasks
E. coli sigma70 promoter prediction
field
links:family:catalog-model-prokbert
target id
catalog-model-prokbert
source locator
Table 3, row ProkBERT-mini-c, column Accuracy; XML row3 column2; ProkBERT official README variant list and primary paper Table 1
review
method: automated_source_review; date: 2026-09-23; note: Source review establishes this relationship only. Exact evaluated configurations and original numerical review status remain unchanged. Catalog model explicitly describes the microbial encoder family including mini, mini-c and mini-long. Preserve paper-specific variant and pipeline identity.
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