Sei, output tracks* (pathogenic/common SNP classification): facets.method_types
Facets: method types of Sei, output tracks* (pathogenic/common SNP classification)
["supervised_machine_learning"]
Correct the method type from conventional_pipeline to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). The review did not read the Feng source. These configurations have no method link. catalog-model-alphagenome is tagged foundation_model; Feng prints AlphaGenome with an asterisk as a non-DNA-foundation comparator.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
7 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Claimed field facets.method_types Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Previous value ["conventional_pipeline"] Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Source location The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Claimed value ["supervised_machine_learning"] Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Description Correct the method type from conventional_pipeline to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). The review did not read the Feng source. These configurations have no method link. catalog-model-alphagenome is tagged foundation_model; Feng prints AlphaGenome with an asterisk as a non-DNA-foundation comparator. Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: subject amp-feng-20261007-config-variant-sei-output-tracks Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Name Sei, output tracks* (pathogenic/common SNP classification): facets.method_types Context-only references | Benchmarking DNA foundation models for genomic and genetic tasks The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning Version: PMC12663285.1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
1 source record and release history
Download this release (gzip)Technical metadata and extraction receipts
Stable ID: metadata-correction-tags-20261012-f243e94c160e04f31a55
- field
- facets.method_types
- previous value
- ["conventional_pipeline"]
- value
- ["supervised_machine_learning"]
- source locator
- The store's Enformer and Sei model records (regulatory-variant-20261009-model-enformer, regulatory-variant-20261009-model-sei) are supervised_machine_learning
- review
- method: automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store, and checked the new value against the method-type definitions and the tags of the records named in source_locator. The cited publication was not re-read for this record.; note: Correct the method type from conventional_pipeline to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). The review did not read the Feng source. These configurations have no method link. catalog-model-alphagenome is tagged foundation_model; Feng prints AlphaGenome with an asterisk as a non-DNA-foundation comparator. Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. See docs/reviews/2026-10-12-method-type-corrections.md.