rewirebio.iobenchmarks
Evidence claim

Exomiser: facets.method_types

Facets: method types of Exomiser

["conventional_pipeline"]

Correct the method type from none to conventional_pipeline (use-case baseline review 2026-10-12, table 2).

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Claimed field
facets.method_types
Context-only references
Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Briefings in Bioinformatics 23(2):bbac019, published 2022-02-04; PMC8921623 full-text XML
Retrieved: 2026-10-09T21:18:05Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: a0e15e5a113ecbc1c8a3b17072a4028c55ae53c09ba0677d6fdb7601cfc8f1ca

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed field
facets.method_types
Context-only references
Automated reanalysis of genomic data for rare disease diagnostics at scale

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature Medicine 2026 final publication, 24 June 2026
Retrieved: 2026-09-30T21:24:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 629b9578ac42717245256feca69dc9c9d5442deb7d282dd1bdc5a6c1a1efd2ec

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Previous value
absent
Context-only references
Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Briefings in Bioinformatics 23(2):bbac019, published 2022-02-04; PMC8921623 full-text XML
Retrieved: 2026-10-09T21:18:05Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: a0e15e5a113ecbc1c8a3b17072a4028c55ae53c09ba0677d6fdb7601cfc8f1ca

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Previous value
absent
Context-only references
Automated reanalysis of genomic data for rare disease diagnostics at scale

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature Medicine 2026 final publication, 24 June 2026
Retrieved: 2026-09-30T21:24:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 629b9578ac42717245256feca69dc9c9d5442deb7d282dd1bdc5a6c1a1efd2ec

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison
Context-only references
Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Briefings in Bioinformatics 23(2):bbac019, published 2022-02-04; PMC8921623 full-text XML
Retrieved: 2026-10-09T21:18:05Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: a0e15e5a113ecbc1c8a3b17072a4028c55ae53c09ba0677d6fdb7601cfc8f1ca

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison
Context-only references
Automated reanalysis of genomic data for rare disease diagnostics at scale

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature Medicine 2026 final publication, 24 June 2026
Retrieved: 2026-09-30T21:24:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 629b9578ac42717245256feca69dc9c9d5442deb7d282dd1bdc5a6c1a1efd2ec

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
["conventional_pipeline"]
Context-only references
Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Briefings in Bioinformatics 23(2):bbac019, published 2022-02-04; PMC8921623 full-text XML
Retrieved: 2026-10-09T21:18:05Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: a0e15e5a113ecbc1c8a3b17072a4028c55ae53c09ba0677d6fdb7601cfc8f1ca

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
["conventional_pipeline"]
Context-only references
Automated reanalysis of genomic data for rare disease diagnostics at scale

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature Medicine 2026 final publication, 24 June 2026
Retrieved: 2026-09-30T21:24:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 629b9578ac42717245256feca69dc9c9d5442deb7d282dd1bdc5a6c1a1efd2ec

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
Correct the method type from none to conventional_pipeline (use-case baseline review 2026-10-12, table 2).
Context-only references
Evaluation of phenotype-driven gene prioritization methods for Mendelian diseases

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Briefings in Bioinformatics 23(2):bbac019, published 2022-02-04; PMC8921623 full-text XML
Retrieved: 2026-10-09T21:18:05Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: a0e15e5a113ecbc1c8a3b17072a4028c55ae53c09ba0677d6fdb7601cfc8f1ca

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
Correct the method type from none to conventional_pipeline (use-case baseline review 2026-10-12, table 2).
Context-only references
Automated reanalysis of genomic data for rare disease diagnostics at scale

Original source ↗

Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Nature Medicine 2026 final publication, 24 June 2026
Retrieved: 2026-09-30T21:24:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 629b9578ac42717245256feca69dc9c9d5442deb7d282dd1bdc5a6c1a1efd2ec

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

2 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-tags-20261012-dbbfeef91a6cd8b4259a

field
facets.method_types
previous value
absent
value
["conventional_pipeline"]
source locator
Other Exomiser configurations; Yuan et al. 2022 Table 2 classes Exomiser by phenotype comparison
review
method: automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store, and checked the new value against the method-type definitions and the tags of the records named in source_locator. The cited publication was not re-read for this record.; note: Correct the method type from none to conventional_pipeline (use-case baseline review 2026-10-12, table 2). Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. See docs/reviews/2026-10-12-method-type-corrections.md.
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