rewirebio.iobenchmarks
Evidence claim

SAIL: facets.method_types

Facets: method types of SAIL

["supervised_machine_learning"]

Correct the method type from none to supervised_machine_learning (use-case baseline review 2026-10-12, table 1).

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

21 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Claimed field
facets.method_types
Context-only references
msalign: Primary paper PDF

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v1
Retrieved: 2026-09-16T20:04:04.777728+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Claimed field
facets.method_types
Context-only references
MassSpecGym: A benchmark for the discovery and identification of molecules

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2410.23326v1
Retrieved: 2026-09-17T07:56:11.146650+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 82176d50e8947c8b9baa2a0d91493f5680c0e4c7e25a2266ff7879f48a58c40c

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Claimed field
facets.method_types
Context-only references
MSAlign arXiv v2 Table 3

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v2, 25 September 2026
Retrieved: 2026-09-30

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: a31d1167b0ded72f64717881dd6cba0946a56b495d76f169d8e44115c3266fda

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Previous value
absent
Context-only references
msalign: Primary paper PDF

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v1
Retrieved: 2026-09-16T20:04:04.777728+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
absent
Context-only references
MassSpecGym: A benchmark for the discovery and identification of molecules

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2410.23326v1
Retrieved: 2026-09-17T07:56:11.146650+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 82176d50e8947c8b9baa2a0d91493f5680c0e4c7e25a2266ff7879f48a58c40c

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Previous value
absent
Context-only references
MSAlign arXiv v2 Table 3

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v2, 25 September 2026
Retrieved: 2026-09-30

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: a31d1167b0ded72f64717881dd6cba0946a56b495d76f169d8e44115c3266fda

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss
Context-only references
msalign: Primary paper PDF

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v1
Retrieved: 2026-09-16T20:04:04.777728+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Source location
MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss
Context-only references
MassSpecGym: A benchmark for the discovery and identification of molecules

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2410.23326v1
Retrieved: 2026-09-17T07:56:11.146650+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 82176d50e8947c8b9baa2a0d91493f5680c0e4c7e25a2266ff7879f48a58c40c

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Source location
MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss
Context-only references
MSAlign arXiv v2 Table 3

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v2, 25 September 2026
Retrieved: 2026-09-30

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: a31d1167b0ded72f64717881dd6cba0946a56b495d76f169d8e44115c3266fda

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
["supervised_machine_learning"]
Context-only references
msalign: Primary paper PDF

Original source ↗

MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2605.19752v1
Retrieved: 2026-09-16T20:04:04.777728+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

3 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-tags-20261012-87e88ff31c79cbf30392

field
facets.method_types
previous value
absent
value
["supervised_machine_learning"]
source locator
MassSpecGym Section 4.1: Fingerprint FFN "employs a feedforward neural network to predict the Morgan fingerprint", and DeepSets; MSAlign arXiv 2605.19752 Table 1 and "Baselines" (v1 and v2): JESTR "pretrains with batch InfoNCE", Emb-Cos "uses candidates InfoNCE to learn a shared space", SAIL is trained with the batch loss
review
method: source-hash-verification; automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store; re-retrieved the source (matches the source record) and read the passage in source_locator; checked the new value against the method-type definitions in data/vocab/method-type.ttl.; artifact sha256: 7395a55141ee7916741b7d9e6d4f42a1d3a03217a36ce6824ac3ff48afd4f26f; retrieval url: https://arxiv.org/pdf/2605.19752v1; note: Correct the method type from none to supervised_machine_learning (use-case baseline review 2026-10-12, table 1). Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. MSAlign v1 Section 5.1 "Baselines" and Table 1: FFN and DeepSets are fingerprint predictors from MassSpecGym; JESTR, Emb-Cos and SAIL are trained with InfoNCE losses; MSAlign aligns two frozen foundation models. See docs/reviews/2026-10-12-method-type-corrections.md.
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