rewirebio.iobenchmarks
Evidence claim

DiffDock-L (LiPP evaluation): facets.method_types

Facets: method types of DiffDock-L (LiPP evaluation)

["supervised_machine_learning"]

Correct the method type from specialist to supervised_machine_learning (use-case baseline review 2026-10-12, table 2).

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

7 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-23-5347695500ed
Property and statementOriginal source and locationReview and provenance
Claimed field
facets.method_types
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Previous value
["specialist"]
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Source location
LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Claimed value
["supervised_machine_learning"]
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Description
Correct the method type from specialist to supervised_machine_learning (use-case baseline review 2026-10-12, table 2).
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Relationship: subject
lit-structure-20261011-lipp-config-diffdock-l
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:lit-structure-20261011-lipp-config-diffdock-l

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Name
DiffDock-L (LiPP evaluation): facets.method_types
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

Release 2026-10-23-5347695500ed · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-tags-20261012-7a1e3080438e1e4a5863

field
facets.method_types
previous value
["specialist"]
value
["supervised_machine_learning"]
source locator
LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"
review
method: source-hash-verification; automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store; re-retrieved the source (matches the source record) and read the passage in source_locator; checked the new value against the method-type definitions in data/vocab/method-type.ttl.; artifact sha256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13292216/fullTextXML; note: Correct the method type from specialist to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. See docs/reviews/2026-10-12-method-type-corrections.md.
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