rewirebio.iobenchmarks
Evidence claim

DiffDock-L: facets.method_types

Facets: method types of DiffDock-L

["supervised_machine_learning"]

Correct the method type from specialist to supervised_machine_learning (use-case baseline review 2026-10-12, table 2).

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

28 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statementOriginal source and locationReview and provenance
Claimed field
facets.method_types
Context-only references
DiffDock-L official resource

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Claimed field
facets.method_types
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Claimed field
facets.method_types
Context-only references
gcorso/DiffDock: README.md

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284
Retrieved: 2026-09-16T19:46:19.329065+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Claimed field
facets.method_types
Context-only references
diffdockl: Primary paper PDF

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2402.18396v1
Retrieved: 2026-09-16T20:04:04.777388+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: c8022ecbf5a2e628e42a03302a5595390020d40d65cc630490c5803ff6c14170

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
["specialist"]
Context-only references
DiffDock-L official resource

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Previous value
["specialist"]
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Previous value
["specialist"]
Context-only references
gcorso/DiffDock: README.md

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284
Retrieved: 2026-09-16T19:46:19.329065+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
["specialist"]
Context-only references
diffdockl: Primary paper PDF

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2402.18396v1
Retrieved: 2026-09-16T20:04:04.777388+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: c8022ecbf5a2e628e42a03302a5595390020d40d65cc630490c5803ff6c14170

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Source location
LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"
Context-only references
DiffDock-L official resource

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Source location
LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"
Context-only references
The LiPP Benchmark Set for Modeling Lipid–Protein Complexes: Comparison of Co-Folding and Docking Methods

Original source ↗

LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: PMC13292216.1
Retrieved: 2026-09-17T07:56:27.507412+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

4 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-tags-20261012-61f87a1144c77e2fe051

field
facets.method_types
previous value
["specialist"]
value
["supervised_machine_learning"]
source locator
LiPP: "AI-based docking tool", "Trained on complexes in PDBbind before 2019"
review
method: source-hash-verification; automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store; re-retrieved the source (matches the source record) and read the passage in source_locator; checked the new value against the method-type definitions in data/vocab/method-type.ttl.; artifact sha256: 6ff34f2f709a14858a3753abf9f8f6efa1e7e3c351f15c70cf64264193a9414e; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13292216/fullTextXML; note: Correct the method type from specialist to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. See docs/reviews/2026-10-12-method-type-corrections.md.
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