CPPC original submission row 2 (PPI_Weighted): facets.method_types
Facets: method types of CPPC original submission row 2 (PPI_Weighted)
["supervised_machine_learning"]
Correct the method type from none to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). Note S1 describes the authors' reimplementation of this submission from its write-up and code (Table S2 column I). The method maps each gene to features, then a predictor is fitted on Screen 1 (main-text Methods, "Implementation of top methods"; Figure 2A). The submitted write-ups (Document S1, Google Drive) were not read, so the submission's own predictor is not known.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
21 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Claimed field facets.method_types Context-only references | CPPC Supplementary Note S1: implementation of methods and hyperparameter selection CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplement 1 (media-1.pdf) of 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: artifact_sha256 is the SHA-256 of the extracted member media-1.pdf. The archive digest describes one retrieval; a first download of the same URL was truncated and is not recorded. The licence is the article's, as printed in the Europe PMC full-text XML (PMC13228547). Archive member: media-1.pdf |
| Claimed field facets.method_types Context-only references | Cancer Immunotherapy Data Science Challenge CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 10.64898/2026.05.21.726863v1; 2026 preprint | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Claimed field facets.method_types Context-only references | CPPC Table S2 original and reimplemented submission comparisons CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Table S2 media-3.xlsx, 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Archive member: media-3.xlsx |
| Previous value absent Context-only references | CPPC Supplementary Note S1: implementation of methods and hyperparameter selection CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplement 1 (media-1.pdf) of 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: artifact_sha256 is the SHA-256 of the extracted member media-1.pdf. The archive digest describes one retrieval; a first download of the same URL was truncated and is not recorded. The licence is the article's, as printed in the Europe PMC full-text XML (PMC13228547). Archive member: media-1.pdf |
| Previous value absent Context-only references | Cancer Immunotherapy Data Science Challenge CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 10.64898/2026.05.21.726863v1; 2026 preprint | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Previous value absent Context-only references | CPPC Table S2 original and reimplemented submission comparisons CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Table S2 media-3.xlsx, 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Archive member: media-3.xlsx |
| Source location CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Context-only references | CPPC Supplementary Note S1: implementation of methods and hyperparameter selection CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplement 1 (media-1.pdf) of 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: artifact_sha256 is the SHA-256 of the extracted member media-1.pdf. The archive digest describes one retrieval; a first download of the same URL was truncated and is not recorded. The licence is the article's, as printed in the Europe PMC full-text XML (PMC13228547). Archive member: media-1.pdf |
| Source location CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Context-only references | Cancer Immunotherapy Data Science Challenge CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 10.64898/2026.05.21.726863v1; 2026 preprint | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Source location CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Context-only references | CPPC Table S2 original and reimplemented submission comparisons CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Table S2 media-3.xlsx, 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Archive member: media-3.xlsx |
| Claimed value ["supervised_machine_learning"] Context-only references | CPPC Supplementary Note S1: implementation of methods and hyperparameter selection CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Supplement 1 (media-1.pdf) of 10.64898/2026.05.21.726863v1 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: artifact_sha256 is the SHA-256 of the extracted member media-1.pdf. The archive digest describes one retrieval; a first download of the same URL was truncated and is not recorded. The licence is the article's, as printed in the Europe PMC full-text XML (PMC13228547). Archive member: media-1.pdf |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: source checked
3 source records and release history
- Cancer Immunotherapy Data Science Challenge · Original source · 10.64898/2026.05.21.726863v1; 2026 preprint
- CPPC Table S2 original and reimplemented submission comparisons · Original source · Table S2 media-3.xlsx, 10.64898/2026.05.21.726863v1
- CPPC Supplementary Note S1: implementation of methods and hyperparameter selection · Original source · Supplement 1 (media-1.pdf) of 10.64898/2026.05.21.726863v1
Technical metadata and extraction receipts
Stable ID: metadata-correction-tags-20261012-0b43508191be87e220fc
- field
- facets.method_types
- previous value
- absent
- value
- ["supervised_machine_learning"]
- source locator
- CPPC Supplementary Note S1, PPI_Weighted: features averaged over STRING-network neighbours, then a fitted predictor
- review
- method: source-hash-verification; automated-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that prepared the corrections; no human review claimed; date: 2026-10-12; method note: Compared previous_value with origin/main and the store; re-retrieved the source (member media-1.pdf (Note S1); Table S2 member media-3.xlsx and the article XML also match their source records) and read the passage in source_locator; checked the new value against the method-type definitions in data/vocab/method-type.ttl.; artifact sha256: 80ee7ad255296a5650247f06bb1915af12adf6644c2b619417d6940e77368e9b; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC13228547/supplementaryFiles; note: Correct the method type from none to supervised_machine_learning (use-case baseline review 2026-10-12, table 2). Note S1 describes the authors' reimplementation of this submission from its write-up and code (Table S2 column I). The method maps each gene to features, then a predictor is fitted on Screen 1 (main-text Methods, "Implementation of top methods"; Figure 2A). The submitted write-ups (Document S1, Google Drive) were not read, so the submission's own predictor is not known. Evidence from docs/reviews/use-cases/baselines-2026-10-12.md. Independent review 2026-10-12: approved. Checked against Note S1 and Table S2 columns A to D and G to K only. Note S1 describes the authors' reimplementation; the original write-ups were not read. See docs/reviews/2026-10-12-method-type-corrections.md.