rewirebio.iobenchmarks
Evidence claim

Select a tumour RNA fusion-detection workflow: attributes.evidence_gaps[10]

Evidence gaps[10] of Select a tumour RNA fusion-detection workflow

Only one workflow (Arriba with manual review) is scored against orthogonal clinical assays (Kim et al. 2026, acute leukaemia); its specificity counts RNA-seq-only fusions as errors, although some are well-known recurrent fusions and one was confirmed by RT-PCR and Sanger sequencing.

Correct the citation year for Kim et al. (Ann Lab Med 2026;46(3):257-269, published online 2025-10-16) and the Lin depth ratio (1.4 M against 11.2 M mean reads is about one eighth, not one tenth). Historical releases retain the previous value.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

7 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-22-1b7cf027e4f6
Property and statementOriginal source and locationReview and provenance
Claimed field
attributes.evidence_gaps[10]
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Previous value
Only one workflow (Arriba with manual review) is scored against orthogonal clinical assays (Kim et al. 2025, acute leukaemia); its specificity counts RNA-seq-only fusions as errors, although some are well-known recurrent fusions and one was confirmed by RT-PCR and Sanger sequencing.
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
Only one workflow (Arriba with manual review) is scored against orthogonal clinical assays (Kim et al. 2026, acute leukaemia); its specificity counts RNA-seq-only fusions as errors, although some are well-known recurrent fusions and one was confirmed by RT-PCR and Sanger sequencing.
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
Correct the citation year for Kim et al. (Ann Lab Med 2026;46(3):257-269, published online 2025-10-16) and the Lin depth ratio (1.4 M against 11.2 M mean reads is about one eighth, not one tenth). Historical releases retain the previous value.
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
use-case-tumour-rna-fusion-detection
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:use-case-tumour-rna-fusion-detection

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Name
Select a tumour RNA fusion-detection workflow: attributes.evidence_gaps[10]
Context-only references
Detection of Fusion Genes Using RNA Sequencing in Acute Leukemia

Original source ↗

Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)

Version: Annals of Laboratory Medicine 46(3), epub 2025-10-16; PMC13071280 full-text XML
Retrieved: 2026-10-11T21:37:42Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: 4d3a6d48fc107763bffe18ff7dbcb6ab97b86757e69ff89ae595f3243f30bad1

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-22-1b7cf027e4f6 · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-qa-20261012-aafb3f51268970855cd1

field
attributes.evidence_gaps[10]
previous value
Only one workflow (Arriba with manual review) is scored against orthogonal clinical assays (Kim et al. 2025, acute leukaemia); its specificity counts RNA-seq-only fusions as errors, although some are well-known recurrent fusions and one was confirmed by RT-PCR and Sanger sequencing.
value
Only one workflow (Arriba with manual review) is scored against orthogonal clinical assays (Kim et al. 2026, acute leukaemia); its specificity counts RNA-seq-only fusions as errors, although some are well-known recurrent fusions and one was confirmed by RT-PCR and Sanger sequencing.
source locator
Crossref record for 10.3343/alm.2025.0300 (volume 46, issue 3, pages 257-269, print 2026-05-01); Lin et al. 2026 dataset records (mean 1.4 M and 11.2 M reads)
review
method: automated-source-review; method note: Compared previous_value with origin/main e79f7a5 and value with the working tree byte for byte; confirmed against Crossref (10.3343/alm.2025.0300: volume 46, issue 3, pages 257-269, online 2025-10-16, print 2026-05-01) that the volume and print year is 2026, matching how the store cites other sources published online in one year and in print the next (You et al. 2026, Dalla-Torre et al. 2025).; reviewer: claude; reviewer note: Separate Claude review agent, independent of the agent that made the change; no human review claimed; date: 2026-10-12; note: Correct the citation year for Kim et al. (Ann Lab Med 2026;46(3):257-269, published online 2025-10-16) and the Lin depth ratio (1.4 M against 11.2 M mean reads is about one eighth, not one tenth). Historical releases retain the previous value. Independent review 2026-10-12: correct as made.
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