rewirebio.iobenchmarks
Evidence claim

Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx): evidence concerns

Evidence concerns of Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

[] (moved to attributes.limitations)

The two extraction-time concerns do not put any value in doubt, so they no longer block comparison of the 600 workbook results; both are kept as limitations.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

7 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-23-5347695500ed
Property and statementOriginal source and locationReview and provenance
Claimed field
attributes.evidence_concerns
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Previous value
[{"source_id": "gfm-guides-20261014-kedzierska2025-source-additional-file-1", "message": "The workbook numbers its tables differently from the article's Additional file 1 caption. Workbook TableS1 = dataset overview (caption S7); TableS2 = sources and pretraining overlap (caption S3); TableS3 = ranks of median scores (caption S2); TableS4 = average ranking (caption S4); TableS5 = UMAP average ranking (caption S6); TableS6 = embedding scores (caption S1); TableS7 = UMAP scores (caption S5). The in-sheet titles match the workbook sheet names. Locators use the workbook sheet names.", "source_locator": "Workbook sheet names and cell A1/B1 titles; article page 10, 'Supplementary information', Additional file 1 caption", "artifact_sha256": "7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e", "review_date": "2026-10-14"}, {"source_id": "gfm-guides-20261014-kedzierska2025-source-additional-file-1", "message": "Which of the two columns per model holds the whole-dataset score and which the 10-repeat subsample summary is not labelled; the single-value column is read as the whole-dataset score. The central statistic and the range type of the bracketed column are not stated.", "source_locator": "Sheets TableS6 and TableS7, row 2 merged headers C2:D2 to Q2:R2; captions in cell A1", "artifact_sha256": "7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e", "review_date": "2026-10-14"}]
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Source location
Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Claimed value
[] (moved to attributes.limitations)
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Description
The two extraction-time concerns do not put any value in doubt, so they no longer block comparison of the 600 workbook results; both are kept as limitations.
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
gfm-guides-20261014-kedzierska2025-source-additional-file-1
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:gfm-guides-20261014-kedzierska2025-source-additional-file-1

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Name
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx): attributes.evidence_concerns
Context-only references
Kedzierska et al. 2025, Additional file 1 (Supplementary Tables S1-S7, xlsx)

Original source ↗

Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'

Version: Additional file 1 (13059_2025_3574_MOESM1_ESM.xlsx) of the version of record
Retrieved: 2026-10-14T12:01:36Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-23-5347695500ed · Record review: source checked

1 source record and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-df99ebcd9115296b9133

field
attributes.evidence_concerns
previous value
[{"source_id": "gfm-guides-20261014-kedzierska2025-source-additional-file-1", "message": "The workbook numbers its tables differently from the article's Additional file 1 caption. Workbook TableS1 = dataset overview (caption S7); TableS2 = sources and pretraining overlap (caption S3); TableS3 = ranks of median scores (caption S2); TableS4 = average ranking (caption S4); TableS5 = UMAP average ranking (caption S6); TableS6 = embedding scores (caption S1); TableS7 = UMAP scores (caption S5). The in-sheet titles match the workbook sheet names. Locators use the workbook sheet names.", "source_locator": "Workbook sheet names and cell A1/B1 titles; article page 10, 'Supplementary information', Additional file 1 caption", "artifact_sha256": "7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e", "review_date": "2026-10-14"}, {"source_id": "gfm-guides-20261014-kedzierska2025-source-additional-file-1", "message": "Which of the two columns per model holds the whole-dataset score and which the 10-repeat subsample summary is not labelled; the single-value column is read as the whole-dataset score. The central statistic and the range type of the bracketed column are not stated.", "source_locator": "Sheets TableS6 and TableS7, row 2 merged headers C2:D2 to Q2:R2; captions in cell A1", "artifact_sha256": "7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e", "review_date": "2026-10-14"}]
value
[] (moved to attributes.limitations)
source locator
Sheets TableS3 and TableS6; article page 4-5 and page 10 'Supplementary information'
review
method: source-hash-verification; scope-review; method note: Sheet numbering checked against the article caption; the column reading checked by recomputing TableS3 ranks from each column.; reviewer: claude; reviewer note: Claude (Opus 5.5) research agent, independent of the extractor; no human review claimed; date: 2026-10-14; artifact sha256: 7adee1211206c4071981a402617c293048baeeeaf415b68ecd13383678003b5e; retrieval url: https://static-content.springer.com/esm/art%3A10.1186%2Fs13059-025-03574-x/MediaObjects/13059_2025_3574_MOESM1_ESM.xlsx; note: See docs/reviews/2026-10-14-gfm-guide-evidence-review.md.
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