rewirebio.iobenchmarks
Evidence claim

ESMFold: description

Description of ESMFold

ESMFold predicts protein structures directly from amino-acid sequence using ESM-2 representations.

Replace a placeholder description with a sourced functional description (issue #88). Historical releases retain the original value.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

28 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-23-5347695500ed
Property and statementOriginal source and locationReview and provenance
Claimed field
description
Context-only references
ESMFold official resource

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Claimed field
description
Context-only references
facebookresearch/esm: README.md

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2b369911bb5b4b0dda914521b9475cad1656b2ac
Retrieved: 2026-09-16T19:46:19.090082+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 8b273c21a322fc9473d1b68d0dd40c8166ab2f89e4a190aa26ca87251b97cba9

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Claimed field
description
Context-only references
facebook/esmfold_v1: config.json

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 75a3841ee059df2bf4d56688166c8fb459ddd97a
Retrieved: 2026-09-16T20:04:02.231029+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 6b98125e2685fef2875499f6bd7c83968a077993ab53f99bf5581113665f7cc6

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Claimed field
description
Context-only references
facebook/esmfold_v1: README.md

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 75a3841ee059df2bf4d56688166c8fb459ddd97a
Retrieved: 2026-09-16T20:04:02.231029+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 12c535c3711211dcd3947ff8164d2e1428ca3461ef8a631ea7b6419673322fe2

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
Context-only references
ESMFold official resource

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Previous value
Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
Context-only references
facebookresearch/esm: README.md

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2b369911bb5b4b0dda914521b9475cad1656b2ac
Retrieved: 2026-09-16T19:46:19.090082+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 8b273c21a322fc9473d1b68d0dd40c8166ab2f89e4a190aa26ca87251b97cba9

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
Context-only references
facebook/esmfold_v1: config.json

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 75a3841ee059df2bf4d56688166c8fb459ddd97a
Retrieved: 2026-09-16T20:04:02.231029+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 6b98125e2685fef2875499f6bd7c83968a077993ab53f99bf5581113665f7cc6

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Previous value
Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
Context-only references
facebook/esmfold_v1: README.md

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 75a3841ee059df2bf4d56688166c8fb459ddd97a
Retrieved: 2026-09-16T20:04:02.231029+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.previous_value

Source artifact SHA-256: 12c535c3711211dcd3947ff8164d2e1428ca3461ef8a631ea7b6419673322fe2

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

Source location
Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config
Context-only references
ESMFold official resource

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: Not recorded
Retrieved: 2026-09-16T10:50:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: Not recorded

Hash scope: Hash scope not separately documented; inspect source record

Source location
Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config
Context-only references
facebookresearch/esm: README.md

Original source ↗

Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config

Shared locator for this statement’s cited sources; not a separate locator for each citation.

Version: 2b369911bb5b4b0dda914521b9475cad1656b2ac
Retrieved: 2026-09-16T19:46:19.090082+00:00

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 8b273c21a322fc9473d1b68d0dd40c8166ab2f89e4a190aa26ca87251b97cba9

Hash scope: SHA-256 of retrieved original artifact bytes

Format: original_artifact

Inspected artifact

How to read the evidence

Sources and history

Release 2026-10-23-5347695500ed · Record review: source checked

4 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: metadata-correction-abf628d2496b8189e19d

areas
proteins-complexes
method types
foundation_model
field
description
previous value
Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
value
ESMFold predicts protein structures directly from amino-acid sequence using ESM-2 representations.
source locator
Reviewed profile summary (2026-09-16): evidence-official-29d4b229a3aa426a6dfb, evidence-official-fa53ab621979fb5f37c8, evidence-official-867f2d1dcb4084248daa: ESM README: ESMFold Structure Prediction; official facebook/esmfold_v1 model card and config.json esmfold_config
review
method: automated-source-review; ai-assisted-source-review; reviewer: claude; reviewer note: Extractor: Claude integrator agent for issue #88. Reviewer: a separate Claude review agent, independent of the extractor; no human review claimed.; date: 2026-10-11; method note: Compared the store diff with origin/main, read each new description against its cited source passage and checked the licence of each new source record.; note: Approved. Checked the new sources' licences against the arXiv abstract pages and Europe PMC, the 7 scFoundation pipeline descriptions against their abstracts, the language-model descriptions against their model cards and reports, and the TAPE architecture figures against the TAPE paper; all correct. The catalogue entries reuse reviewed profile summaries.; receipt: data/omics/qa-descriptions-20261011-b/review.json
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