Evidence claim

DiffDock-NMDN: description

End-to-end blind docking and virtual screening protocol: DiffDock samples ligand poses, the normalised mixture density network score selects a pose, and an interaction module estimates binding affinity.

Replace a placeholder description with a sourced functional description (issue #88). Historical releases retain the original value.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

14 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Claimed field description Context-only references	gcorso/DiffDock README.md Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284 Retrieved: 2026-09-16T20:00:00.818010+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.field` Source artifact SHA-256: `6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Claimed field description Context-only references	Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record Retrieved: 2026-09-16T10:41:16.552697+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.field` Source artifact SHA-256: `194b21478aaedd9a7384cabb8b0040ca5b6a4938f4d275627b86a6b787affc20` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Previous value Identity as reported in this paper. Unspecified versions are not assumed equivalent to other papers. Context-only references	gcorso/DiffDock README.md Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284 Retrieved: 2026-09-16T20:00:00.818010+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.previous_value` Source artifact SHA-256: `6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Previous value Identity as reported in this paper. Unspecified versions are not assumed equivalent to other papers. Context-only references	Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record Retrieved: 2026-09-16T10:41:16.552697+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.previous_value` Source artifact SHA-256: `194b21478aaedd9a7384cabb8b0040ca5b6a4938f4d275627b86a6b787affc20` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Source location Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Context-only references	gcorso/DiffDock README.md Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284 Retrieved: 2026-09-16T20:00:00.818010+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Source location Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Context-only references	Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record Retrieved: 2026-09-16T10:41:16.552697+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `194b21478aaedd9a7384cabb8b0040ca5b6a4938f4d275627b86a6b787affc20` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Claimed value End-to-end blind docking and virtual screening protocol: DiffDock samples ligand poses, the normalised mixture density network score selects a pose, and an interaction module estimates binding affinity. Context-only references	gcorso/DiffDock README.md Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284 Retrieved: 2026-09-16T20:00:00.818010+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.value` Source artifact SHA-256: `6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Claimed value End-to-end blind docking and virtual screening protocol: DiffDock samples ligand poses, the normalised mixture density network score selects a pose, and an interaction module estimates binding affinity. Context-only references	Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record Retrieved: 2026-09-16T10:41:16.552697+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.value` Source artifact SHA-256: `194b21478aaedd9a7384cabb8b0040ca5b6a4938f4d275627b86a6b787affc20` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Description Replace a placeholder description with a sourced functional description (issue #88). Historical releases retain the original value. Context-only references	gcorso/DiffDock README.md Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 85c49b60d3e0b0182a59ee43a34a6d7036981284 Retrieved: 2026-09-16T20:00:00.818010+00:00	not individually reviewed No individual claim review recorded Audit details Field: `description` Source artifact SHA-256: `6f63088d85b5f05d58416ede319387c1b7f3661b27741a36314ada861f2056de` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact
Description Replace a placeholder description with a sourced functional description (issue #88). Historical releases retain the original value. Context-only references	Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening Original source ↗ Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record Retrieved: 2026-09-16T10:41:16.552697+00:00	not individually reviewed No individual claim review recorded Audit details Field: `description` Source artifact SHA-256: `194b21478aaedd9a7384cabb8b0040ca5b6a4938f4d275627b86a6b787affc20` Hash scope: Hash scope not separately documented; inspect source record Inspected artifact

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Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

2 source records and release history

Normalized Protein–Ligand Distance Likelihood Score for End-to-End Blind Docking and Virtual Screening · Original source · version of record
gcorso/DiffDock README.md · Original source · 85c49b60d3e0b0182a59ee43a34a6d7036981284

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Technical metadata and extraction receipts

Stable ID: metadata-correction-5e572580a65c3de030d2

areas: molecular-interactions
field: description
previous value: Identity as reported in this paper. Unspecified versions are not assumed equivalent to other papers.
value: End-to-end blind docking and virtual screening protocol: DiffDock samples ligand poses, the normalised mixture density network score selects a pose, and an interaction module estimates binding affinity.
source locator: Reviewed profile (2026-09-16): summary at DiffDock-NMDN Blind Docking and Virtual Screening Protocol (paragraph 1); Abstract (paragraph 1); architecture fact at Methods/Ligand Conformation Stability and Solvation Energetics (paragraph 1); Methods/Normalized Mixture Density Network Module/Training Loss for the NMDN Modules (paragraph 2); description text also read at Abstract
review: method: automated-source-review; ai-assisted-source-review; reviewer: claude; reviewer note: Extractor: Claude integrator agent for issue #88. Reviewer: a separate Claude review agent, independent of the extractor; no human review claimed.; date: 2026-10-11; method note: Compared the store diff with origin/main, read each new description against its cited source passage and checked the licence of each new source record.; note: Approved. Checked all 11 scTab and MPRabc method descriptions against PMC11298532 and PMC13232518, and Lazypipe-nt, scaLR, CATHe2, DiffDock-NMDN, PC-mer and Hi-Enhancer against their papers; all match. The other pipeline descriptions are consistent with their pinned papers.; receipt: data/omics/qa-descriptions-20261011-c/review.json

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subject: DiffDock-NMDN

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