Evidence claim

SpliceAI: description

Description of SpliceAI

SpliceAI annotates sequence variants with predicted splice acceptor and donor changes.

Replace a placeholder description with a sourced functional description (issue #88). Historical releases retain the original value.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

21 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-11-02-a7f03c9e55a5
Property and statement	Original source and location	Review and provenance
Claimed field description Context-only references	SpliceAI official resource Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded Retrieved: 2026-09-16T10:50:02Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.field` Source artifact SHA-256: `Not recorded` Hash scope: Hash scope not separately documented; inspect source record
Claimed field description Context-only references	Illumina/SpliceAI: README.md Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 03f42437aaf56dc5dfd822c4ccee5aec1a705079 Retrieved: 2026-09-16T19:46:17.769160+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.field` Source artifact SHA-256: `8e5203afe343100832391e6155c7112f15cfe60bf0c21681d64e3420f854ef4d` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Claimed field description Context-only references	spliceai: Primary paper PDF Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Cell 2019 published article PDF, university-hosted copy Retrieved: 2026-09-16T20:04:38.697838+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.field` Source artifact SHA-256: `e0d62bfd97c26907e184a6a262eb277e3ad0737322373df282c9832b56697dda` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Previous value Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review. Context-only references	SpliceAI official resource Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded Retrieved: 2026-09-16T10:50:02Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.previous_value` Source artifact SHA-256: `Not recorded` Hash scope: Hash scope not separately documented; inspect source record
Previous value Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review. Context-only references	Illumina/SpliceAI: README.md Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 03f42437aaf56dc5dfd822c4ccee5aec1a705079 Retrieved: 2026-09-16T19:46:17.769160+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.previous_value` Source artifact SHA-256: `8e5203afe343100832391e6155c7112f15cfe60bf0c21681d64e3420f854ef4d` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Previous value Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review. Context-only references	spliceai: Primary paper PDF Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Cell 2019 published article PDF, university-hosted copy Retrieved: 2026-09-16T20:04:38.697838+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.previous_value` Source artifact SHA-256: `e0d62bfd97c26907e184a6a262eb277e3ad0737322373df282c9832b56697dda` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Source location Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Context-only references	SpliceAI official resource Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded Retrieved: 2026-09-16T10:50:02Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `Not recorded` Hash scope: Hash scope not separately documented; inspect source record
Source location Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Context-only references	Illumina/SpliceAI: README.md Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 03f42437aaf56dc5dfd822c4ccee5aec1a705079 Retrieved: 2026-09-16T19:46:17.769160+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `8e5203afe343100832391e6155c7112f15cfe60bf0c21681d64e3420f854ef4d` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Source location Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Context-only references	spliceai: Primary paper PDF Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Cell 2019 published article PDF, university-hosted copy Retrieved: 2026-09-16T20:04:38.697838+00:00	not individually reviewed No individual claim review recorded Audit details Field: `attributes.source_locator` Source artifact SHA-256: `e0d62bfd97c26907e184a6a262eb277e3ad0737322373df282c9832b56697dda` Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact Inspected artifact
Claimed value SpliceAI annotates sequence variants with predicted splice acceptor and donor changes. Context-only references	SpliceAI official resource Original source ↗ Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded Retrieved: 2026-09-16T10:50:02Z	not individually reviewed No individual claim review recorded Audit details Field: `attributes.value` Source artifact SHA-256: `Not recorded` Hash scope: Hash scope not separately documented; inspect source record

How to read the evidence

Sources and history

Release 2026-11-02-a7f03c9e55a5 · Record review: source checked

3 source records and release history

SpliceAI official resource · Original source · Not reported
Illumina/SpliceAI: README.md · Original source · 03f42437aaf56dc5dfd822c4ccee5aec1a705079
spliceai: Primary paper PDF · Original source · Cell 2019 published article PDF, university-hosted copy

Download this release (gzip)

Technical metadata and extraction receipts

Stable ID: metadata-correction-1f234cc377dbc5d0d895

areas: dna-genomes
method types: specialist
field: description
previous value: Existing candidate catalogue entry; exact checkpoint and metadata require primary-source review.
value: SpliceAI annotates sequence variants with predicted splice acceptor and donor changes.
source locator: Reviewed profile summary (2026-09-16): evidence-official-864a2c5ea6e61aa310f9, evidence-official-ded281404bd1a0f3fdb7: Jaganathan et al., Cell 2019, STAR Methods: SpliceAI architecture and Model training and testing (pp. e2–e3); README.md: usage and License
review: method: automated-source-review; ai-assisted-source-review; reviewer: claude; reviewer note: Extractor: Claude integrator agent for issue #88. Reviewer: a separate Claude review agent, independent of the extractor; no human review claimed.; date: 2026-10-11; method note: Compared the store diff with origin/main, read each new description against its cited source passage and checked the licence of each new source record.; note: Approved. Checked the new sources' licences against the arXiv abstract pages and Europe PMC, the 7 scFoundation pipeline descriptions against their abstracts, the language-model descriptions against their model cards and reports, and the TAPE architecture figures against the TAPE paper; all correct. The catalogue entries reuse reviewed profile summaries.; receipt: data/omics/qa-descriptions-20261011-b/review.json

Related records

subject: SpliceAI

Suggest a correction