rewirebio.iobenchmarks
Evidence claim

metric_definition: ctdnameth-20261009-protocol-sun2024-cfmethyl-detection-auc

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-09-ba02f2f4a36e
Property and statementOriginal source and locationReview and provenance
attributes.field
metric_definition
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Methods 'Assessment of deconvolution performance on real-world datasets' (P49)
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.value
ROC-AUC of random forest models for disease detection built with the estimated cell-type fractions from each deconvolution method as predictors; the reference atlas used all data of the 35 cell types.
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
ctdnameth-20261009-protocol-sun2024-cfmethyl-detection-auc
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:ctdnameth-20261009-protocol-sun2024-cfmethyl-detection-auc

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
metric_definition: ctdnameth-20261009-protocol-sun2024-cfmethyl-detection-auc
Context-only references
Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA

Original source ↗

Methods 'Assessment of deconvolution performance on real-world datasets' (P49)

Version: Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
Retrieved: 2026-10-09T19:58:16Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-09-ba02f2f4a36e · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: ctdnameth-20261009-claim-sun2024-auc-definition

field
metric_definition
value
ROC-AUC of random forest models for disease detection built with the estimated cell-type fractions from each deconvolution method as predictors; the reference atlas used all data of the 35 cell types.
source locator
Methods 'Assessment of deconvolution performance on real-world datasets' (P49)
review
method: source-hash-verification; ai-assisted-source-review; method note: Re-downloaded the article XML and matched its SHA-256; compared the claim with body paragraph P49 (Methods 'Assessment of deconvolution performance on real-world datasets'). Locator corrected from P41, which is the sequencing-depth filter paragraph, to P49.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: ce2ac8671cfddf088b33efb150ca50354181de81ca6bfb181dd5bf387c6714e8; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11660681/fullTextXML; note: Text matches the cited paragraphs. Descriptive claim; no value or execution.
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