post_processing: cnv-20261009-config-delavega2025-dragen42-hs-filters
Descriptive fact transcribed from the pinned source.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
6 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field post_processing Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_locator Methods 2.5 Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.value HS-F removes calls under 500 bp or over 10 Mb, junction-only calls over 1 Mb, calls overlapping centromere or telomere gaps, and calls with >=90% reciprocal overlap with recurrent artifacts, using RTG vcffilter with a custom JavaScript. Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| description Descriptive fact transcribed from the pinned source. Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Relationship: subject cnv-20261009-config-delavega2025-dragen42-hs-filters Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| name post_processing: cnv-20261009-config-delavega2025-dragen42-hs-filters Context-only references | Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications Methods 2.5 Version: Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML | not individually reviewed No individual claim review recorded Source has a recorded evidence concern. Consult its source page before using the claim. Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-10-09-8eac2440869c · Record review: source checked
1 source records and release history
- Benchmarking of germline copy number variant callers from whole genome sequencing data for clinical applications · Original source · Bioinformatics Advances 5(1):vbaf071, published 2025-04-10; PMC12005901 full-text XML
Technical metadata and extraction receipts
Stable ID: cnv-20261009-claim-dragen-hs-filters
- field
- post_processing
- value
- HS-F removes calls under 500 bp or over 10 Mb, junction-only calls over 1 Mb, calls overlapping centromere or telomere gaps, and calls with >=90% reciprocal overlap with recurrent artifacts, using RTG vcffilter with a custom JavaScript.
- source locator
- Methods 2.5
- review
- method: source-hash-verification; ai-assisted-source-review; method note: Re-downloaded the article XML and matched its SHA-256, extracted the section paragraphs with a separate parser and compared the claim text with the cited paragraphs.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: ed6492f89d77454416d4fb135bb56bdcd5fb202e8a0ba94b92fa450441b4091f; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12005901/fullTextXML; note: Hand transcription from article XML text. Pending independent review. Independent review 2026-10-09: wording checked against the cited paragraphs of the article XML.