baseline_gene_overlap: cell-type-20261009-protocol-wu2025-ts-to-hlca
Descriptive fact transcribed from the pinned source.
Evidence
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Evidence table
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6 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field baseline_gene_overlap Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_locator Results 'Cross-dataset validation' paragraph 2 Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.value The scVI baseline (figure only) depends on the reference HVGs being present in the query: 99.95% matched from HLCA to Tabula Sapiens but 71.35% from Tabula Sapiens to HLCA, where scVI fell short of all scFMs. Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| description Descriptive fact transcribed from the pinned source. Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Relationship: subject cell-type-20261009-protocol-wu2025-ts-to-hlca Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| name baseline_gene_overlap: cell-type-20261009-protocol-wu2025-ts-to-hlca Context-only references | Biology-driven insights into the power of single-cell foundation models Results 'Cross-dataset validation' paragraph 2 Version: Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
Release 2026-10-10-6e93f504adfc · Record review: source checked
1 source records and release history
- Biology-driven insights into the power of single-cell foundation models · Original source · Genome Biology 26:334, published 2025-10-03; PMC12492631 full-text XML
Technical metadata and extraction receipts
Stable ID: cell-type-20261009-claim-wu2025-scvi-gene-match
- field
- baseline_gene_overlap
- value
- The scVI baseline (figure only) depends on the reference HVGs being present in the query: 99.95% matched from HLCA to Tabula Sapiens but 71.35% from Tabula Sapiens to HLCA, where scVI fell short of all scFMs.
- source locator
- Results 'Cross-dataset validation' paragraph 2
- review
- method: source-hash-verification; ai-assisted-source-review; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: 368051b7cda5acd4864331875a1faac6f1d68e0a209ed999e4c2ee3b25b57c2c; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12492631/fullTextXML; method note: Compared the claim with the cited paragraph of the re-downloaded article XML.; note: Transcribed from the pinned article XML. Pending independent review. Independent review 2026-10-09: matches the source.