Protein homology transfer
Candidate reference for task-specific evaluation; no score is implied.
Evaluation results
0 evaluations · 0 results. Different protocols are not a single leaderboard.
Applied filters: All linked evaluations
No evaluations linked in this release.
Source checking is not independent reproduction. Release 2026-09-29-06401fd5b220.
Applicable tests and references
Applicability is distinct from a completed evaluation.
- CAFA · Proposed association
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
24 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.applicability proposed Context-only references | cafa3 primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC6864930 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.applicability proposed Context-only references | soedinglab/MMseqs2: README.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.applicability proposed Context-only references | soedinglab/MMseqs2 official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.baseline_type biological-procedure Context-only references | cafa3 primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC6864930 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.baseline_type biological-procedure Context-only references | soedinglab/MMseqs2: README.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.baseline_type biological-procedure Context-only references | soedinglab/MMseqs2 official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.requirements Training reference set and homology leakage controls. Context-only references | cafa3 primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC6864930 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.requirements Training reference set and homology leakage controls. Context-only references | soedinglab/MMseqs2: README.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.requirements Training reference set and homology leakage controls. Context-only references | soedinglab/MMseqs2 official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: d401e78c2d18a822cdb1527d7464a043f6035a15 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.scope_note Source documents method or task context; proposed applicability requires protocol review. Context-only references | cafa3 primary benchmark evidence No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: PMC6864930 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: discovered
3 source records and release history
- soedinglab/MMseqs2 official source · Original source · d401e78c2d18a822cdb1527d7464a043f6035a15
- cafa3 primary benchmark evidence · Original source · PMC6864930
- soedinglab/MMseqs2: README.md · Original source · d401e78c2d18a822cdb1527d7464a043f6035a15
Technical metadata and extraction receipts
Stable ID: discovery-baseline-protein-homology-transfer
- areas
- protein-function
- applicability
- proposed
- baseline type
- biological-procedure
- missing metadata
- implementation version: unextracted; protocol applicability: unextracted
- requirements
- Training reference set and homology leakage controls.
- scope note
- Source documents method or task context; proposed applicability requires protocol review.
- entity classification
- review date: 2026-09-17; rationale: This record defines a proposed comparison/reference role. Its biological-procedure value remains a baseline-type facet; the underlying method/model/library is represented by a linked entity where verified. A baseline role is not itself a measured result or a new scientific architecture.; source ids: evidence-discovery-final-cafa3; evidence-official-81e51077d7d3352a6de4; source locator: CAFA3 Methods: Protein-centric evaluation; Figures 3–4 | README.md: opening, Publications, Installation and user-guide pointers; ambiguities: Applicability is proposed. This classification does not certify that the baseline was run, was matched to every linked protocol, or constitutes an experimental ceiling.