Results on linked records
This baseline has no results of its own in this release. One linked record has results. They are not assigned to the underlying baseline: each record keeps its own settings and evaluations, and its scores are on its own page.
- scVI Model · implementation · 2 evaluations · 24 results
Applicable tests and references
Applicability is distinct from a completed evaluation.
- Donor-held-out reference mapping · Proposed association
- Batch integration · Proposed association
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
32 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Applicability proposed Context-only references | scVI official resource No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Applicability proposed Context-only references | scverse/scvi-tools: docs/user_guide/models/scvi.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 73b28e44223621470e582a81a102c107bb22678b | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Applicability proposed Context-only references | scverse/scvi-tools: README.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 73b28e44223621470e582a81a102c107bb22678b | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Applicability proposed Context-only references | theislab/scib official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: cd67913396b4c0430710b3d90f1d1841f5fa4468 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Baseline type established_method Context-only references | scVI official resource No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Baseline type established_method Context-only references | scverse/scvi-tools: docs/user_guide/models/scvi.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 73b28e44223621470e582a81a102c107bb22678b | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Baseline type established_method Context-only references | scverse/scvi-tools: README.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 73b28e44223621470e582a81a102c107bb22678b | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Baseline type established_method Context-only references | theislab/scib official source No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: cd67913396b4c0430710b3d90f1d1841f5fa4468 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Requirements Public software; train a task-specific model on the permitted split. Context-only references | scVI official resource No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: Not recorded | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| Requirements Public software; train a task-specific model on the permitted split. Context-only references | scverse/scvi-tools: docs/user_guide/models/scvi.md No field-specific location recorded Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: 73b28e44223621470e582a81a102c107bb22678b | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
Sources and history
Release 2026-11-02-a7f03c9e55a5 · Record review: discovered
4 source records and release history
- scVI official resource · Original source · Not reported
- scverse/scvi-tools: README.md · Original source · 73b28e44223621470e582a81a102c107bb22678b
- scverse/scvi-tools: docs/user_guide/models/scvi.md · Original source · 73b28e44223621470e582a81a102c107bb22678b
- theislab/scib official source · Original source · cd67913396b4c0430710b3d90f1d1841f5fa4468
Technical metadata and extraction receipts
Stable ID: catalog-baseline-scvi
- areas
- cells-tissues
- baseline type
- established_method
- applicability
- proposed
- requirements
- Public software; train a task-specific model on the permitted split.
- missing metadata
- exact protocol: reason: unextracted
- entity classification
- review date: 2026-09-17; rationale: This record defines a proposed comparison/reference role. Its established_method value remains a baseline-type facet; the underlying method/model/library is represented by a linked entity where verified. A baseline role is not itself a measured result or a new scientific architecture.; source ids: evidence-official-550f6719c2f22f4d57b3; evidence-official-0cbab80c2d1769287a1f; src-discovery-theislab-scib; source locator: docs/user_guide/models/scvi.md: Preliminaries, Generative process, Inference and Limitations | scVI model guide: generative model and latent representation; scIB README: biological-conservation metrics. Donor holdout is this guide’s evaluation requirement, not an asserted scVI default. | README: Metrics, Biological Conservation, Batch Correction and Integration Tools; ambiguities: Applicability is proposed. This classification does not certify that the baseline was run, was matched to every linked protocol, or constitutes an experimental ceiling.
Related records
- implemented by: scVI
- applicable to: Donor-held-out reference mapping
- applicable to: Batch integration