sourmash
FracMinHash k-mer sketching with minimum metagenome cover (gather) and taxonomic aggregation.
No reviewed evaluations are linked here in this release. See the sources and separately identified configurations below.
Overview
FracMinHash k-mer sketching with minimum metagenome cover (gather) and taxonomic aggregation.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
0 evaluations · 0 results. Different protocols are not a single leaderboard.
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Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
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How it works, versions and access
Strengths, limitations and unresolved questions
Evidence
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Evidence table
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
1 source records and release history
- Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets · Original source · BMC Bioinformatics 23:541, published 2022-12-13; PMC9749362 full-text XML
Technical metadata and extraction receipts
Stable ID: dna-pathogen-20261009-method-sourmash
- areas
- microbes-communities
- contexts
- clinical_research
- method types
- conventional_pipeline
- reported name
- sourmash
- entity level
- method
- source locator
- Table 2; Methods 'Sourmash'
- missing metadata
- version: reason: inapplicable; note: Family record; versions are on configurations
Related records
- configuration of: Sourmash-k31 (Portik et al. 2022)
- configuration of: Sourmash-k51 (Portik et al. 2022)