UXM
Fragment-level reference-based deconvolution using the share of unmethylated fragments at marker regions.
No reviewed evaluations are linked here in this release. See the sources and separately identified configurations below.
Overview
Fragment-level reference-based deconvolution using the share of unmethylated fragments at marker regions.
Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.
Evaluations and results
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Source checking is not independent reproduction. Release 2026-10-09-8cc1db47c7f9.
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Evidence
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Sources and history
Release 2026-10-09-8cc1db47c7f9 · Record review: source checked
2 source records and release history
- Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free DNA · Original source · Genome Biology 25:318, published 2024-12-19; PMC11660681.1 full-text XML
- Giuili et al. 2025, Supplementary Table 1 (deconvolution and DMR tools) · Original source · bioRxiv version 1 supplementary file media-3.xlsx
Technical metadata and extraction receipts
Stable ID: ctdnameth-20261009-method-uxm
- areas
- dna-genomes
- contexts
- clinical_research
- method types
- specialist
- reported name
- UXM
- entity level
- method
- source locator
- Tool lists and table row labels of the cited sources
- missing metadata
- version: reason: inapplicable; note: Family record; versions are on configurations
- access
- Code location as printed in the cited Methods: https://github.com/nloyfer/UXM_deconv (Sun et al. 2024 Methods). Licence not stated in the cited sources.
Related records
- configuration of: UXM (DecoNFlow benchmark)
- configuration of: UXM (Sun et al. 2024 benchmark)