rewirebio.iobenchmarks
Evidence claim

selection_bias: splicing-follow-up-20261009-protocol-riepe2021-abca4-ncss

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-6e93f504adfc
Property and statementOriginal source and locationReview and provenance
attributes.field
selection_bias
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Methods 'Datasets' paragraph 2
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.value
The selection criterion for functional validation of the ABCA4 variants was a 2% difference in splice score for at least two of the Alamut programs; for MYBPC3 variants, the selection criterion was a lower MaxEntScan score than the score of the reference nucleotide.
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
splicing-follow-up-20261009-protocol-riepe2021-abca4-ncss
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:splicing-follow-up-20261009-protocol-riepe2021-abca4-ncss

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
selection_bias: splicing-follow-up-20261009-protocol-riepe2021-abca4-ncss
Context-only references
Benchmarking deep learning splice prediction tools using functional splice assays

Original source ↗

Methods 'Datasets' paragraph 2

Version: Human Mutation 42(7):799, published online 2021-05-20; PMC8360004 full-text XML
Retrieved: 2026-10-09T20:52:02Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-10-6e93f504adfc · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: splicing-follow-up-20261009-claim-riepe2021-selection

field
selection_bias
value
The selection criterion for functional validation of the ABCA4 variants was a 2% difference in splice score for at least two of the Alamut programs; for MYBPC3 variants, the selection criterion was a lower MaxEntScan score than the score of the reference nucleotide.
source locator
Methods 'Datasets' paragraph 2
review
method: ai-assisted-source-review; method note: Compared with Methods 'Datasets' paragraph 2 (P7 in body order). Correct as worded. The Discussion adds that the expected bias was not observed; that is recorded in the protocol limitations.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: 595be5360a9d3d421c4d4b6adda30175b4048e1aa0b563eb7afd2b7850277112; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC8360004/fullTextXML; note: Hand transcription checked against the article text by the independent reviewer.
Related records

Suggest a correction