rewirebio.iobenchmarks
Evidence claim

compared_database_releases: rare-reanalysis-20261009-protocol-vestito2024-new-candidate-flagging

Descriptive fact transcribed from the pinned source.

Evidence

Source checking verifies the cited claim or transcription. It does not establish independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

6 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-10-10-6e93f504adfc
Property and statementOriginal source and locationReview and provenance
attributes.field
compared_database_releases
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.field

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.source_locator
Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.source_locator

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

attributes.value
Results paragraph 6 reports that, comparing Exomiser results based on the February 2019 and February 2022 databases, a variant score above 0.8 with a human phenotype score increase of 0.2 highlights 54 new candidates in the 37 cases, 31 of them correct (recall 84%, precision 57%). Supplementary Table 1 prints TP 31 and FP 23 (31 + 23 = 54) for that setting, so the table is read as that comparison; the table itself does not name the releases.
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: attributes.value

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

description
Descriptive fact transcribed from the pinned source.
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: description

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Relationship: subject
rare-reanalysis-20261009-protocol-vestito2024-new-candidate-flagging
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: links:subject:rare-reanalysis-20261009-protocol-vestito2024-new-candidate-flagging

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

name
compared_database_releases: rare-reanalysis-20261009-protocol-vestito2024-new-candidate-flagging
Context-only references
Efficient reinterpretation of rare disease cases using Exomiser

Original source ↗

Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'

Version: npj Genomic Medicine 9:65, published 2024-12-18; PMC11655964 full-text XML
Retrieved: 2026-10-09T20:36:38Z

not individually reviewed

No individual claim review recorded

Audit details

Field: name

Source artifact SHA-256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058

Hash scope: Hash scope not separately documented; inspect source record

Inspected artifact

Sources and history

Release 2026-10-10-6e93f504adfc · Record review: source checked

1 source records and release historyDownload this release (gzip)
Technical metadata and extraction receipts

Stable ID: rare-reanalysis-20261009-claim-vestito2024-database-pair

field
compared_database_releases
value
Results paragraph 6 reports that, comparing Exomiser results based on the February 2019 and February 2022 databases, a variant score above 0.8 with a human phenotype score increase of 0.2 highlights 54 new candidates in the 37 cases, 31 of them correct (recall 84%, precision 57%). Supplementary Table 1 prints TP 31 and FP 23 (31 + 23 = 54) for that setting, so the table is read as that comparison; the table itself does not name the releases.
source locator
Results paragraph 6; Supplementary Table 1 row 'Diff human score 0.2, Var score 0.8'
review
method: source-hash-verification; ai-assisted-source-review; method note: Re-downloaded the article XML and matched its SHA-256, extracted the cited paragraphs and tables with a separate parser and compared the claim text with them.; reviewer: claude; reviewer note: Separate Claude review agent, independent of the extractor; no human review claimed; date: 2026-10-09; artifact sha256: b8cd48ed7e4a337ddf954d1b9bb004305ac78c383268592828e6203418d04058; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11655964/fullTextXML; note: Transcribed from the pinned source. Independent review 2026-10-09: Matches Results paragraph 6 (54 candidates, 31 correct, recall 84%, precision 57%) and the 0.2/0.8 row (TP 31, FP 23; 31/37 = 0.838, 31/54 = 0.574). The claim states the reading as an inference, which it is: the table does not name the releases.
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