EPBDXDNABERT-2: uses model DNABERT-2
Hybrid of DNABERT-2 embeddings and biophysical EPBD features. Currently typed configuration; use component relation, not family; consider separate pipeline reclassification review.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
12 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.field links:uses_model:discovery-model-dnabert-2 Context-only references | MAGICS-LAB/DNABERT_2: README.md TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.field links:uses_model:discovery-model-dnabert-2 Context-only references | Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Context-only references | MAGICS-LAB/DNABERT_2: README.md TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.source_locator TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Context-only references | Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.target_id discovery-model-dnabert-2 Context-only references | MAGICS-LAB/DNABERT_2: README.md TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| attributes.target_id discovery-model-dnabert-2 Context-only references | Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description Hybrid of DNABERT-2 embeddings and biophysical EPBD features. Currently typed configuration; use component relation, not family; consider separate pipeline reclassification review. Context-only references | MAGICS-LAB/DNABERT_2: README.md TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| description Hybrid of DNABERT-2 embeddings and biophysical EPBD features. Currently typed configuration; use component relation, not family; consider separate pipeline reclassification review. Context-only references | Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: subject paper-model-3627ef7080a5afc255 Context-only references | MAGICS-LAB/DNABERT_2: README.md TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: f25bed9ee20db966dff39e5c1571249d04e36404 | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: SHA-256 of retrieved original artifact bytes Format: original_artifact |
| Relationship: subject paper-model-3627ef7080a5afc255 Context-only references | Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2 Shared locator for this statement’s cited sources; not a separate locator for each citation. Version: version of record | not individually reviewed No individual claim review recorded Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
View linked audit checks and correction history
Release 2026-09-29-06401fd5b220 · Record review: source checked
2 source records and release history
- Integrating protein and DNA embeddings for improving genome-wide transcription factor binding site prediction · Original source · version of record
- MAGICS-LAB/DNABERT_2: README.md · Original source · f25bed9ee20db966dff39e5c1571249d04e36404
Technical metadata and extraction receipts
Stable ID: model-evaluation-identity-4e5f5fc5d4b8ae6a3453
- areas
- molecular-interactions
- tasks
- transcription-factor DNA binding-site prediction
- field
- links:uses_model:discovery-model-dnabert-2
- target id
- discovery-model-dnabert-2
- source locator
- TransBind introduction EPBD×DNABERT-2 paragraph and Table 2 | Existing reviewed locator: Table 2., row EPBDXDNABERT-2, column AUROC; XML row6 column2
- review
- method: automated_source_review; date: 2026-09-23; note: Source review establishes this relationship only. Exact evaluated configurations and original numerical review status remain unchanged. Hybrid of DNABERT-2 embeddings and biophysical EPBD features. Currently typed configuration; use component relation, not family; consider separate pipeline reclassification review.
Related records
- subject: EPBDXDNABERT-2